LOCUS BC000779 1907 bp mRNA linear HUM 18-JAN-2005
DEFINITION Homo sapiens CCR4-NOT transcription complex, subunit 1, mRNA (cDNA
clone IMAGE:3504586), partial cds.
ACCESSION BC000779
VERSION BC000779.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1907)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1907)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 1, 2003 this sequence version replaced BC000779.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: m Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42716274.
FEATURES Location/Qualifiers
source 1..1907
/db_xref="H-InvDB:HIT000029913"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3504586"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1907
/gene="CNOT1"
/gene_synonym="AD-005"
/gene_synonym="CDC39"
/gene_synonym="KIAA1007"
/gene_synonym="NOT1"
/gene_synonym="NOT1H"
/db_xref="GeneID:23019"
/db_xref="MIM:604917"
CDS <1..1622
/gene="CNOT1"
/gene_synonym="AD-005"
/gene_synonym="CDC39"
/gene_synonym="KIAA1007"
/gene_synonym="NOT1"
/gene_synonym="NOT1H"
/codon_start=3
/product="CNOT1 protein"
/protein_id="AAH00779.2"
/db_xref="GeneID:23019"
/db_xref="MIM:604917"
/translation="QASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVG
QMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCYHNLDAF
VRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRIFIML
LLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLAHT
PQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLRVLLVLLHDFPEFLCDY
HYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGV
MPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINALVLYVGTQAIAH
IHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCT
MLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHC
APEIEKLFQSVAQCCMGQKQAQQVMEGTGAS"
BASE COUNT 524 a 465 c 395 g 523 t
ORIGIN
1 ctcaagcctc agagtatgat gaccctccag gcctgaggga gaaggcagag tatcttctga
61 gggaatgggt gaatctctac cattcagcag cagctggccg cgacagtacc aaagctttct
121 ctgcatttgt tggacagatg caccagcaag gaatactgaa gaccgatgat ctcataacaa
181 ggttctttcg tctgtgtact gaaatgtgtg ttgaaatcag ttaccgtgct caggctgagc
241 agcagcacaa tcctgctgcc aatcccacca tgatccgagc caagtgctat cacaacctgg
301 atgcctttgt tcgactcatt gcactgctcg tgaaacactc aggggaggcc accaacactg
361 tcacaaagat taatctgctg aacaaggtcc ttggtatagt agtgggagtt ctccttcagg
421 atcatgatgt tcgtcagagt gaatttcagc aacttcccta ccatcgaatt tttatcatgc
481 ttctcttgga actcaatgca cctgagcatg tgttggaaac cattaatttc cagacactta
541 cagctttctg caatacattc cacatcttga ggcctaccaa agctcctggc tttgtatatg
601 cctggcttga actgatttcc catcggatat ttattgcaag aatgctggca catacgccac
661 agcagaaggg gtggcctatg tatgcacagc tactgattga tttattcaaa tatttagcgc
721 ctttccttag aaatgtggaa ctcaccaaac ctatgcaaat cctctacaag ggcactttaa
781 gagtgctgct ggttcttttg catgatttcc cagagttcct ttgtgattac cattatgggt
841 tctgtgatgt gatcccacct aattgtatcc agttaagaaa tttgatcctg agtgcctttc
901 caagaaacat gaggctcccc gacccattca ctcctaatct aaaggtggac atgttgagtg
961 aaattaacat tgctccccgg attctcacca atttcactgg agtaatgcca cctcagttca
1021 aaaaggattt ggattcctat cttaaaactc gatcaccagt cactttcctg tctgatctgc
1081 gcagcaacct acaggtatcc aatgaacctg ggaatcgcta caacctccag ctcatcaatg
1141 cactggtgct ctatgtcggg actcaggcca ttgcgcacat ccacaacaag ggcagcacac
1201 cttcaatgag caccatcact cactcagcac acatggatat cttccagaat ttggctgtgg
1261 acttggacac tgagggtcgc tatctctttt tgaatgcaat tgcaaatcag ctccggtacc
1321 caaatagcca cactcactac ttcagttgca ccatgctgta cctttttgca gaggccaata
1381 cggaagccat ccaagaacag atcacaagag ttctcttgga acggttgatt gtaaataggc
1441 cacatccttg gggtcttctt attaccttca ttgagctgat taaaaaccca gcgtttaagt
1501 tctggaacca tgaatttgta cactgtgccc cagaaatcga aaagttattc cagtcggtcg
1561 cacagtgctg catgggacag aagcaggccc agcaagtaat ggaagggaca ggtgccagtt
1621 agacgaaact gcatctctgt tgtacgtgtc agtctagagg tctcactgca ccgagttcat
1681 aaactgactg aagaatcctt tcagctcttc ctgactttcc cagccctttg gtttgtgggt
1741 atctgcccca actactgttg ggatcagcct cctgtcttat gtgggcacgt tccaaagttt
1801 aaatgcattt ttttgactct tggccaaaat ttagaagatg ctgtgaatat cattttgaac
1861 ttgtgtaaat acatgaaaga gaaaaaaaaa aaaaaaaaaa aaaaaaa
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