LOCUS BC000738 1244 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens emerin, mRNA (cDNA clone MGC:2126 IMAGE:3505626),
complete cds.
ACCESSION BC000738
VERSION BC000738.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1244)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1244)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000738.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: h Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4557552.
FEATURES Location/Qualifiers
source 1..1244
/db_xref="H-InvDB:HIT000029882"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2126 IMAGE:3505626"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1244
/gene="EMD"
/gene_synonym="EDMD"
/gene_synonym="LEMD5"
/gene_synonym="STA"
/db_xref="GeneID:2010"
/db_xref="HGNC:HGNC:3331"
/db_xref="MIM:300384"
CDS 123..887
/gene="EMD"
/gene_synonym="EDMD"
/gene_synonym="LEMD5"
/gene_synonym="STA"
/codon_start=1
/product="emerin"
/protein_id="AAH00738.1"
/db_xref="GeneID:2010"
/db_xref="HGNC:HGNC:3331"
/db_xref="MIM:300384"
/translation="MDNYADLSDTELTTLLRRYNIPHGPVVGSTRRLYEKKIFEYETQ
RRRLSPPSSSAASSYSFSDLNSTRGDADMYDLPKKEDALLYQSKGYNDDYYEESYFTT
RTYGEPESAGPSRAVRQSVTSFPDADAFHHQVHDDDLLSSSEEECKDRERPMYGRDSA
YQSITHYRPVSASRSSLDLSYYPTSSSTSFMSSSSSSSSWLTRRAIRPENRAPGAGLG
QDRQVPLWGQLLLFLVFVIVLFFIYHFMQAEEGNPF"
BASE COUNT 245 a 374 c 333 g 292 t
ORIGIN
1 cgcgagcgcg gccgctcccg atgcgctcgt gccgcccccg ccgtgctcct cggcagccgt
61 tgctcggccg gttttggtag gcccgggccg ccgccaggcc tccgcctgag cccgcacccg
121 ccatggacaa ctacgcagat ctttcggata ccgagctgac caccttgctg cgccggtaca
181 acatcccgca cgggcctgta gtaggatcaa ctcgtaggct ttacgagaag aagatcttcg
241 agtacgagac ccagaggcgg cggctctcgc cccccagctc gtccgccgcc tcctcttata
301 gcttctctga cttgaattcg actagagggg atgcagatat gtatgatctt cccaagaaag
361 aggacgcttt actctaccag agcaagggct acaatgacga ctactatgaa gagagctact
421 tcaccaccag gacttatggg gagcccgagt ctgccggccc gtccagggct gtccgccagt
481 cagtgacttc attcccagat gctgacgctt tccatcacca ggtgcatgat gacgatcttt
541 tgtcttcttc tgaagaggag tgcaaggata gggaacgccc catgtacggc cgggacagtg
601 cctaccagag catcacgcac taccgccctg tttcagcctc caggagctcc ctggacctgt
661 cctattatcc tacttcctcc tccacctctt ttatgtcctc ctcatcatct tcctcttcat
721 ggctcacccg ccgtgccatc cggcctgaaa accgtgctcc tggggctggg ctgggccagg
781 atcgccaggt cccgctctgg ggccagctgc tgcttttcct ggtctttgtg atcgtcctct
841 tcttcattta ccacttcatg caggctgaag aaggcaaccc cttctagagg gagccatgag
901 ggtctgggct tcagagctag gtctttgggg aagtcctggc tgactgcctt agcagtgggg
961 gtgggggtgg gggcaggggc aggggcttta tgtgtttttg cttggggggc gctgggccta
1021 gcccagagta gtgcttgctc cccctgcctt gtcccaccag ggaggcagca gactcaggcc
1081 ctccatggtc ctctttgtca ttttgttgac atgcattcct ccttttgtca tcttgttggg
1141 gggaggggat taaccaaagg ccaccctgac tttgtttttg tggacacaca ataaaagccc
1201 cgtttatttg taaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//