LOCUS BC000725 915 bp mRNA linear HUM 07-NOV-2006
DEFINITION Homo sapiens CD70 molecule, mRNA (cDNA clone MGC:1597
IMAGE:3506629), complete cds.
ACCESSION BC000725
VERSION BC000725.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 915)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 915)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000725.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: o Column: 6
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24119161.
FEATURES Location/Qualifiers
source 1..915
/db_xref="H-InvDB:HIT000029870"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1597 IMAGE:3506629"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..915
/gene="CD70"
/gene_synonym="CD27L"
/db_xref="GeneID:970"
/db_xref="HGNC:HGNC:11937"
/db_xref="MIM:602840"
CDS 97..678
/gene="CD70"
/gene_synonym="CD27L"
/codon_start=1
/product="CD70 molecule"
/protein_id="AAH00725.1"
/db_xref="GeneID:970"
/db_xref="HGNC:HGNC:11937"
/db_xref="MIM:602840"
/translation="MPEEGSGCSVRRRPYGCVLRAALVPLVAGLVICLVVCIQRFAQA
QQQLPLESLGWDVAELQLNHTGPQQDPRLYWQGGPALGRSFLHGPELDKGQLRIHRDG
IYMVHIQVTLAICSSTTASRHHPTTLAVGICSPASRSISLLRLSFHQGCTIASQRLTP
LARGDTLCTNLTGTLLPSRNTDETFFGVQWVRP"
BASE COUNT 209 a 260 c 253 g 193 t
ORIGIN
1 gccccgggag ggggctgcag tttccttcct tccttctcgg cagcgctccg cgcccccatc
61 gcccctcctg cgctagcgga ggtgatcgcc gcggcgatgc cggaggaggg ttcgggctgc
121 tcggtgcggc gcaggcccta tgggtgcgtc ctgcgggctg ctttggtccc attggtcgcg
181 ggcttggtga tctgcctcgt ggtgtgcatc cagcgcttcg cacaggctca gcagcagctg
241 ccgctcgagt cacttgggtg ggacgtagct gagctgcagc tgaatcacac aggacctcag
301 caggacccca ggctatactg gcaggggggc ccagcactgg gccgctcctt cctgcatgga
361 ccagagctgg acaaggggca gctacgtatc catcgtgatg gcatctacat ggtacacatc
421 caggtgacgc tggccatctg ttcctccacg acggcctcca ggcaccaccc caccaccctg
481 gccgtgggaa tctgctctcc cgcctcccgt agcatcagcc tgctgcgtct cagcttccac
541 caaggttgta ccattgcctc ccagcgcctg acgcccctgg cccgagggga cacactctgc
601 accaacctca ctgggacact tttgccttcc cgaaacactg atgagacctt ctttggagtg
661 cagtgggtgc gcccctgacc actgctgctg attagggttt tttaaatttt attttatttt
721 atttaagttc aagagaaaaa gtgtacacac aggggccacc cggggttggg gtgggagtgt
781 ggtggggggt agtggtggca ggacaagaga aggcattgag ctttttcttt cattttccta
841 ttaaaaaata caaaaatcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
901 aaaaaaaaaa aaaaa
//