LOCUS BC000723 2484 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens carnitine acetyltransferase, mRNA (cDNA clone MGC:1564
IMAGE:3504259), complete cds.
ACCESSION BC000723
VERSION BC000723.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2484)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2484)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000723.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 7 Row: g Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21618330.
FEATURES Location/Qualifiers
source 1..2484
/db_xref="H-InvDB:HIT000029868"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1564 IMAGE:3504259"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2484
/gene="CRAT"
/gene_synonym="CAT1"
/db_xref="GeneID:1384"
/db_xref="HGNC:HGNC:2342"
/db_xref="MIM:600184"
CDS 222..1856
/gene="CRAT"
/gene_synonym="CAT1"
/codon_start=1
/product="carnitine acetyltransferase"
/protein_id="AAH00723.1"
/db_xref="GeneID:1384"
/db_xref="HGNC:HGNC:2342"
/db_xref="MIM:600184"
/translation="MLAFAARTVVKPLGFLKPFSLMKASSRFKAHQDALPRLPVPPLQ
QSLDHYLKALQPIVSEEEWAHTKQLVDEFQASGGVGERLQKGLERRARKTENWLSEWW
LKTAYLQYRQPVVIYSSPGVMLPKQDFVDLQGQLRFAAKLIEGVLDFKVMIDNETLPV
EYLGGKPLCMNQYYQILSSCRVPGPKQDTVSNFSKTKKPPTHITVVHNYQFFELDVYH
SDGTPLTADQIFVQLEKIWNSSLQTNKEPVGILTSNHRNSWAKAYNTLIKDKVNRDSV
RSIQKKPELVRSPMVPLPMPKKLRFNITPEIKSDIEKAKQNLSIMIQDLDITVMVFHH
FGKDFPKSEKLSPDAFIQMALQLAYYRIYGQACATYESASLRMFHLGRTDTIRSASMD
SLTFVKAMDDSSVTEHQKVELLRKAVQAHRGYTDRAIRGEAFDRHLLGLKLQAIEDLV
SMPDIFMDTSYAIAMHFHLSTSQVPAKTDCVMFFGPVVPDGYGVCYNPMEAHINFSLS
AYNSCAETNAARLAHYLEKALLDMRALLQSHPRAKL"
BASE COUNT 513 a 825 c 695 g 451 t
ORIGIN
1 gccccgcctc gcgagtcctc ctccccgggt gcctgcccgc agcccgctcg gcccagaggg
61 tgggcgcggg gctgcctcta ccggctggcg gctgtaactc agcgaccttg gcccgaaggc
121 tctagcaagg acccaccgac cccagccgcg gcggcggcgg cgcggacttt gcccggtgtg
181 tggggcggag cggactgcgt gtccgcggac gggcagcgaa gatgttagcc ttcgctgcca
241 ggaccgtggt gaagcctctg ggcttcctga agcccttctc cttgatgaag gcttccagcc
301 gcttcaaggc acaccaggat gcactgccac ggctgcccgt gccccctctc cagcagtccc
361 tggaccacta cctgaaggcg ctgcagccca tcgtgagtga ggaggagtgg gcccacacca
421 agcagctggt ggatgagttt caggcctcag gaggtgtagg ggagcgcctg cagaaggggc
481 tggagcgtcg ggccaggaag acggagaact ggctgtctga gtggtggctc aagaccgcct
541 acctccagta ccgccagcct gtggtcatct actcgagccc aggcgtgatg ctacccaagc
601 aggacttcgt ggacctgcag ggtcagctcc gatttgctgc caaactcatt gagggtgtgt
661 tggatttcaa ggtcatgatt gacaacgaga ccctgcccgt ggagtacctg ggggggaagc
721 cactgtgcat gaaccagtac tatcagatct tgtcctcctg ccgagtgccg ggccccaagc
781 aggacacagt cagcaacttc agcaagacca agaagcctcc cacgcacatc accgtggtac
841 acaactacca gttttttgag ctggatgtgt accacagtga cgggacaccc ctcactgcgg
901 atcagatctt tgtgcagctg gagaagatct ggaactcatc cctacagacc aacaaggagc
961 ctgtgggcat cctcacctcc aaccaccgca actcctgggc caaggcatac aacaccctca
1021 tcaaagacaa ggtgaaccgg gattccgtgc gctccatcca gaagaaaccc gagcttgtgc
1081 ggtctcccat ggtgcccctg cccatgccca agaagctgcg gttcaacatc acccccgaga
1141 tcaagagcga catcgagaag gccaagcaga acctcagcat catgatccag gacctggata
1201 tcaccgtgat ggtgttccac cattttggaa aagacttccc caagtcggag aagctaagcc
1261 cagatgcctt catccagatg gctttgcagc tggcctacta caggatctac ggacaggcat
1321 gtgccaccta tgaaagtgcc tccctgcgca tgtttcacct gggccgcacc gacaccatcc
1381 gctcggcttc catggactca ctcacctttg tcaaggccat ggatgactcc agcgtcacgg
1441 agcaccagaa ggtggagctg ctgcggaagg ccgtgcaggc ccaccgaggc tacaccgacc
1501 gggccatccg cggggaggcc tttgatcgac acctgctggg cctgaagctg caggccatcg
1561 aggacctggt gagcatgccc gacatcttca tggacacctc ctacgccatc gccatgcact
1621 tccacctctc caccagccag gtccctgcca agacagactg tgtcatgttc ttcgggcccg
1681 tggtccccga cggctacggt gtctgctata accccatgga ggcccacatc aacttctccc
1741 tgtcggccta caacagctgc gcggagacca acgccgcccg cctggcgcat tacctggaga
1801 aggcgctcct ggacatgcgt gccctgctgc agagccaccc ccgggccaag ctctgagccc
1861 ctaggactca ggcctgccaa tgccacagcc aagcccaccc taggatgggc cacccaccag
1921 ggctcagctc cttggttccc tcttccttgg ttccctcttc cctggtcccc ccaaatctac
1981 tgagccacgg accgcatcct ccagggggcc tgcaggcccc agccaagtgc cttccgtggg
2041 tcatcccagc acctgccagg gcccgacctg gggctgagtg cagaggctga gcaggacgtt
2101 aggcccgggc ccctggcacg tcctccaccg gtgcctcctc tggggaaggg aaccagccct
2161 ccagagcagg agactggcaa gagctctttg tctcaccagc tcagccccgg ccactccctg
2221 ccaactccat gaccaggcca ccatctgtac cctgcttccc aaactcccag gacctggaga
2281 caggattgtc tggggccgag gggccagggt gtgaggtttc acctccgttg cggctgtgct
2341 cctgtggata acattgctag cgagccgcct ctggttccac tcagcttggt tcctgccccc
2401 gccctgctgt atgatattaa tgtggaaggt catcaataaa ggggaattgt gttggtgaaa
2461 aaaaaaaaaa aaaaaaaaaa aaaa
//