LOCUS BC000715 927 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens C-type lectin domain family 4, member E, mRNA (cDNA clone MGC:1246 IMAGE:3507103), complete cds. ACCESSION BC000715 VERSION BC000715.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 927) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 927) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000715.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 7 Row: i Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 7657332. FEATURES Location/Qualifiers source 1..927 /db_xref="H-InvDB:HIT000029860" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:1246 IMAGE:3507103" /tissue_type="Kidney, renal cell adenocarcinoma" /clone_lib="NIH_MGC_14" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..927 /gene="CLEC4E" /gene_synonym="MINCLE" /db_xref="GeneID:26253" /db_xref="HGNC:HGNC:14555" /db_xref="MIM:609962" CDS 84..743 /gene="CLEC4E" /gene_synonym="MINCLE" /codon_start=1 /product="C-type lectin domain family 4, member E" /protein_id="AAH00715.1" /db_xref="GeneID:26253" /db_xref="HGNC:HGNC:14555" /db_xref="MIM:609962" /translation="MNSSKSSETQCTERGCFSSQMFLWTVAGIPILFLSACFITRCVV TFRIFQTCDEKKFQLPENFTELSCYNYGSGSVKNCCPLNWEYFQSSCYFFSTDTISWA LSLKNCSAMGAHLVVINSQEEQEFLSYKKPKMREFFIGLSDQVVEGQWQWVDGTPLTK SLSFWDVGEPNNIATLEDCATMRDSSNPRQNWNDVTCFLNYFRICEMVGINPLNKGKS L" BASE COUNT 317 a 179 c 198 g 233 t ORIGIN 1 caaaacactc ctgaggagaa agaaagagag ggagggagag aaaaagagag agagagaaac 61 aaaaaaccaa agagagagaa aaaatgaatt catctaaatc atctgaaaca caatgcacag 121 agagaggatg cttctcttcc caaatgttct tatggactgt tgctgggatc cccatcctat 181 ttctcagtgc ctgtttcatc accagatgtg ttgtgacatt tcgcatcttt caaacctgtg 241 atgagaaaaa gtttcagcta cctgagaatt tcacagagct ctcctgctac aattatggat 301 caggttcagt caagaattgt tgtccattga actgggaata ttttcaatcc agctgctact 361 tcttttctac tgacaccatt tcctgggcgt taagtttaaa gaactgctca gccatggggg 421 ctcacctggt ggttatcaac tcacaggagg agcaggaatt cctttcctac aagaaaccta 481 aaatgagaga gttttttatt ggactgtcag accaggttgt cgagggtcag tggcaatggg 541 tggacggcac acctttgaca aagtctctga gcttctggga tgtaggggag cccaacaaca 601 tagctaccct ggaggactgt gccaccatga gagactcttc aaacccaagg caaaattgga 661 atgatgtaac ctgtttcctc aattattttc ggatttgtga aatggtagga ataaatcctt 721 tgaacaaagg aaaatctctt taagaacaga aggcacaact caaatgtgta aagaaggaag 781 agcaagaaca tggccacacc caccgcccca cacgagaaat ttgtgcgctg aacttcaaag 841 gacttcataa gtatttgtta ctctgatata aataaaaata agtagtttta aatgttataa 901 ttcatgaaaa aaaaaaaaaa aaaaaaa //