LOCUS BC000689 744 bp mRNA linear HUM 21-SEP-2006
DEFINITION Homo sapiens peptidylprolyl isomerase A (cyclophilin A), mRNA (cDNA
clone MGC:2351 IMAGE:3349335), complete cds.
ACCESSION BC000689
VERSION BC000689.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 744)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 744)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC000689.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: l Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56847631.
FEATURES Location/Qualifiers
source 1..744
/db_xref="H-InvDB:HIT000029837"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2351 IMAGE:3349335"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..744
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
CDS 23..520
/gene="PPIA"
/gene_synonym="CYPA"
/gene_synonym="CYPH"
/gene_synonym="MGC12404"
/codon_start=1
/product="peptidylprolyl isomerase A (cyclophilin A)"
/protein_id="AAH00689.1"
/db_xref="GeneID:5478"
/db_xref="HGNC:HGNC:9253"
/db_xref="MIM:123840"
/translation="MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEK
GFGYKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMAN
AGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIAD
CGQLE"
BASE COUNT 201 a 166 c 177 g 200 t
ORIGIN
1 ggaaaaccgt gtactattag ccatggtcaa ccccaccgtg ttcttcgaca ttgccgtcga
61 cggcgagccc ttgggccgcg tctcctttga gctgtttgca gacaaggtcc caaagacagc
121 agaaaatttt cgtgctctga gcactggaga gaaaggattt ggttataagg gttcctgctt
181 tcacagaatt attccagggt ttatgtgtca gggtggtgac ttcacacgcc ataatggcac
241 tggtggcaag tccatctatg gggagaaatt tgaagatgag aacttcatcc taaagcatac
301 gggtcctggc atcttgtcca tggcaaatgc tggacccaac acaaatggtt cccagttttt
361 catctgcact gccaagactg agtggttgga tggcaagcat gtggtgtttg gcaaagtgaa
421 agaaggcatg aatattgtgg aggccatgga gcgctttggg tccaggaatg gcaagaccag
481 caagaagatc accattgctg actgtggaca actcgaataa gtttgacttg tgttttatct
541 taaccaccag atcattcctt ctgtagctca ggagagcacc cctccacccc atttgctcgc
601 agtatcctag aatctttgtg ctctcgctgc agttcccttt gggttccatg ttttccttgt
661 tccctcccat gcctagctgg attgcagagt taagtttatg attatgaaat aaaaactaaa
721 taacaaaaaa aaaaaaaaaa aaaa
//