LOCUS BC000683 1736 bp mRNA linear HUM 31-AUG-2004
DEFINITION Homo sapiens family with sequence similarity 46, member A, mRNA
(cDNA clone MGC:1079 IMAGE:3349780), complete cds.
ACCESSION BC000683
VERSION BC000683.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1736)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1736)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000683.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: j Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923041.
FEATURES Location/Qualifiers
source 1..1736
/db_xref="H-InvDB:HIT000029832"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1079 IMAGE:3349780"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1736
/gene="FAM46A"
/gene_synonym="C6orf37"
/gene_synonym="FLJ20037"
/db_xref="GeneID:55603"
CDS 326..1654
/gene="FAM46A"
/gene_synonym="C6orf37"
/gene_synonym="FLJ20037"
/codon_start=1
/product="FAM46A protein"
/protein_id="AAH00683.1"
/db_xref="GeneID:55603"
/translation="MAEGEGYFAMSEDELACSPYIPLGGDFGGGDFGGGDFGGGDFGG
GGSFGGHCLDYCESPTAHCNVLNWEQVQRLDGILSETIPIHGRGNFPTLELQPSLIVK
VVRRRLAEKRIGVRDVRLNGSAASHVLHQDSGLGYKDLDLIFCADLRGEGEFQTVKDV
VLDCLLDFLPEGVNKEKITPLTLKEAYVQKMVKVCNDSDRWSLISLSNNSGKNVELKF
VDSLRRQFEFSVDSFQIKLDSLLLFYECSENPMTETFHPTIIGESVYGDFQEAFDHLC
NKIIATRNPEEIRGGGLLKYCNLLVRGFRPASDEIKTLQRYMCSRFFIDFSDIGEQQR
KLESYLQNHFVGLEDRKYEYLMTLHGVVNESTVCLMGHERRQTLNLITMLAIRVLADQ
NVIPNVANVTCYYQPAPYVADANFSNYYIAQVQPVFTCQQQTYSTWLPCN"
BASE COUNT 423 a 441 c 505 g 367 t
ORIGIN
1 cagagacacg agcgtgtgtg gcagcaagag ccgccagttc gggaccaccg cagctggggt
61 ggcagcggcg caggaggggt cgcggggagg gagtggtgag cgcaggcggc aggggtctgg
121 gaaagacgaa gtcgctattt gctgtctgag cgcgctcgca gctcctggaa gtgttgccgc
181 ctctcggttt cgctctcgct cgctgcgctc ctagaagggg cggccgcctc caggtgacac
241 agacgggact ctcgcttgcg ctttccagat gcatcagaga tacttttgga ctgaccaggg
301 ccaagtggcg ctcggcgggc actacatggc ggagggtgaa gggtacttcg ccatgtctga
361 ggacgagctg gcctgcagcc cctacatccc cctaggcggc gacttcggcg gcggcgactt
421 cggcggcggc gacttcggcg gcggcgactt cggcggtggc ggcagcttcg gtgggcattg
481 cttggactat tgcgaaagcc ctacggcgca ctgcaatgtg ctgaactggg agcaagtgca
541 gcggctggac ggcatcctga gcgagaccat tccgattcac gggcgcggca acttccccac
601 gctcgagctg cagccgagcc tgatcgtgaa ggtggtgcgg cggcgcctgg ccgagaagcg
661 cattggcgtc cgcgacgtgc gcctcaacgg ctcggcagcc agccatgtcc tgcaccagga
721 cagcggcctg ggctacaagg acctggacct catcttctgc gccgacctgc gcggggaagg
781 ggagtttcag actgtgaagg acgtcgtgct ggactgcctg ttggacttct tacccgaggg
841 ggtgaacaaa gagaagatca caccactcac gctcaaggaa gcttatgtgc agaaaatggt
901 taaagtgtgc aatgactctg accgatggag tcttatatcc ctgtcaaaca acagtggcaa
961 aaatgtggaa ctgaaatttg tggattccct ccggaggcag tttgaattca gtgtagattc
1021 ttttcaaatc aaattagact ctcttctgct cttttatgaa tgttcagaga acccaatgac
1081 tgagacattt caccccacaa taatcgggga gagcgtctat ggcgatttcc aggaagcctt
1141 tgatcacctt tgtaacaaga tcattgccac caggaaccca gaggaaatcc gagggggagg
1201 cctgcttaag tactgcaacc tcttggtgag gggctttagg cccgcctctg atgaaatcaa
1261 gacccttcaa aggtatatgt gttccaggtt tttcatcgac ttctcagaca ttggagagca
1321 gcagagaaaa ctggagtcct atttgcagaa ccactttgtg ggattggaag accgcaagta
1381 tgagtatctc atgacccttc atggagtggt aaatgagagc acagtgtgcc tgatgggaca
1441 tgaaagaaga cagactttaa accttatcac catgctggct atccgggtgt tagctgacca
1501 aaatgtcatt cctaatgtgg ctaatgtcac ttgctattac cagccagccc cctatgtagc
1561 agatgccaac tttagcaatt actacattgc acaggttcag ccagtattca cgtgccagca
1621 acagacctac tccacttggc taccctgcaa ttaagaatca tttaaaaatg tcctgtgggg
1681 aagccatttc agacaagaca ggagagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
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