LOCUS BC000682 1138 bp mRNA linear HUM 24-JUL-2006
DEFINITION Homo sapiens DiGeorge syndrome critical region gene 6-like, mRNA
(cDNA clone MGC:1411 IMAGE:3349309), complete cds.
ACCESSION BC000682
VERSION BC000682.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1138)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1138)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000682.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: j Column: 18.
FEATURES Location/Qualifiers
source 1..1138
/db_xref="H-InvDB:HIT000029831"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1411 IMAGE:3349309"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1138
/gene="DGCR6L"
/gene_synonym="FLJ10666"
/db_xref="GeneID:85359"
/db_xref="HGNC:HGNC:18551"
/db_xref="MIM:609459"
CDS 54..716
/gene="DGCR6L"
/gene_synonym="FLJ10666"
/codon_start=1
/product="DiGeorge syndrome critical region gene 6-like"
/protein_id="AAH00682.1"
/db_xref="GeneID:85359"
/db_xref="HGNC:HGNC:18551"
/db_xref="MIM:609459"
/translation="MERYAAALEEVADGARQQERHYQLLSALQSLVKELPSSFQQRLS
YTTLSDLALALLDGTVFEIVQGLLEIQHLTEKSLYNQRLRLQNEHRVLRQALRQKHQE
AQQACRPHNLPVVQAAQQRELEAVEHRIREEQRAMDQKIILELDRKVADQQSTLEKAG
VAGFYVTTNPQELMLQMNLLELIRKLQQRGCRAGNAALGLGGPWQSPAAQCDQKGSPV
PP"
BASE COUNT 248 a 355 c 358 g 177 t
ORIGIN
1 gtgaagctgg gggagctcgt cgccgccgcc ggcggctagc gggcgtccgc gccatggagc
61 gctacgcggc cgccttggag gaggtggcgg acggtgcccg gcagcaggag cgacactacc
121 agttgctgtc ggcgctacag agcctggtga aggagttgcc cagctctttc cagcagcgcc
181 tgtcctacac cacgctcagc gacctggccc tggcgcttct cgacggcacc gtgttcgaaa
241 tcgtgcaggg gctactggag atccagcacc tcaccgaaaa gagcctgtac aaccagcgcc
301 tgcgcctaca gaacgagcac cgagtgctca ggcaggcgct gcggcagaag caccaggaag
361 cccagcaggc ctgccggccc cacaacctgc ctgtggttca ggcggctcag cagcgagaac
421 tagaggccgt ggaacaccgg atccgtgagg agcagcgggc gatggaccag aagatcatcc
481 tggagctgga ccggaaggtg gctgaccagc agagcacact ggagaaggcg ggggtggctg
541 gcttctacgt gaccaccaac ccacaggagc tgatgctgca gatgaacctg ctggaactca
601 tccgaaagct gcagcagagg ggctgccggg cagggaatgc agccctggga ctgggaggtc
661 cctggcagtc gcctgctgcc cagtgtgacc agaaaggcag ccctgtccca ccatagccac
721 aggcagcaga agtctgggca gagttcatct tcttgacctt tggccactgc cttcccagct
781 gcccgcaggg ggttccccct gctgaggaga gaccaggtgg accccagctg cctgtcaccc
841 ttcatctggg acttgctgtc aaaccctagg atagtctcat aaaggggagg ctgggccagc
901 ctgctgctgt ctgcttcagg accaggcaga gagtgaggct gggggttctc acaccttact
961 ccaccgggca catcccaacc tgcactgggg cccacccgag cgcttgttct ggtctcagcc
1021 gctcccttgg cagctgcagc ccccatgcag aagaggctcc caggcccaag ctctgtgtga
1081 cccagagaaa taaagatgcc tcagtgtggc ccaaaaaaaa aaaaaaaaaa aaaaaaaa
//