LOCUS       BC000660                1549 bp    mRNA    linear   HUM 04-OCT-2003
DEFINITION  Homo sapiens interferon regulatory factor 3, mRNA (cDNA clone
            MGC:1716 IMAGE:3347928), complete cds.
ACCESSION   BC000660
VERSION     BC000660.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1549)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (15-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Aug 19, 2003 this sequence version replaced BC000660.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: DCTD/DTP
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 5 Row: d Column: 6
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 4504724.
FEATURES             Location/Qualifiers
     source          1..1549
                     /db_xref="H-InvDB:HIT000050388"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:1716 IMAGE:3347928"
                     /tissue_type="Kidney, renal cell adenocarcinoma"
                     /clone_lib="NIH_MGC_14"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1549
                     /gene="IRF3"
                     /db_xref="GeneID:3661"
                     /db_xref="MIM:603734"
     CDS             156..1514
                     /gene="IRF3"
                     /codon_start=1
                     /product="IRF3 protein"
                     /protein_id="AAH00660.1"
                     /db_xref="GeneID:3661"
                     /db_xref="MIM:603734"
                     /translation="MGTPKPRILPWLVSQLDLGQLEGVAWVNKSRTRFRIPWKHGLRQ
                     DAQQEDFGIFQAWAEATGAYVPGRDKPDLPTWKRNFRSALNRKEGLRLAEDRSKDPHD
                     PHKIYEFVNSGVGDFSQPDTSPDTNGGGSTSDTQEDILDELLGNMVLAPLPDPGPPSL
                     AVAPEPCPQPLRSPSLDNPTPFPNLGPSENPLKRLLVPGEEWEFEVTAFYRGRQVFQQ
                     TISCPEGLRLVGSEVGDRTLPGWPVTLPDPGMSLTDRGVMSYVRHVLSCLGGGLALWR
                     AGQWLWAQRLGHCHTYWAVSEELLPNSGHGPDGEVPKDKEGGVFDLGPFIVGSWAPRS
                     DYLHGRKRTLTTLCPLVLCGGVMAPGPAVDQEARDGQGCAHVPQGLGRNGPGRGCLLP
                     GEYCGPAHFQQPPTLPHLRPVQGLPAGLGGGHGFPGPWGELSPRSSWCASNPPVPHHL
                     NQ"
     misc_feature    156..488
                     /gene="IRF3"
                     /note="IRF; Region: interferon regulatory factor"
                     /db_xref="CDD:smart00348"
BASE COUNT          326 a          470 c          480 g          273 t
ORIGIN      
        1 tcaagaagtc gatcaaaaag aaagccccag cgctctagag ctcagctgac gggaaagggg
       61 gtgcgcagcc tcgagtttga gagctacccg gagctccaag acaggggtgg gttccagctg
      121 cccgcacgcc ccgaccttcc atcgtaggcc ggaccatggg aaccccaaag ccacggatcc
      181 tgccctggct ggtgtcgcag ctggacctgg ggcaactgga gggcgtggcc tgggtgaaca
      241 agagccgcac gcgcttccgc atcccttgga agcacggcct acggcaggat gcacagcagg
      301 aggatttcgg aatcttccag gcctgggccg aggccactgg tgcatatgtt cccgggaggg
      361 ataagccaga cctgccaacc tggaagagga atttccgctc tgccctcaac cgcaaagaag
      421 ggttgcgttt agcagaggac cggagcaagg accctcacga cccacataaa atctacgagt
      481 ttgtgaactc aggagttggg gacttttccc agccagacac ctctccggac accaatggtg
      541 gaggcagtac ttctgatacc caggaagaca ttctggatga gttactgggt aacatggtgt
      601 tggccccact cccagatccg ggacccccaa gcctggctgt agcccctgag ccctgccctc
      661 agcccctgcg gagccccagc ttggacaatc ccactccctt cccaaacctg gggccctctg
      721 agaacccact gaagcggctg ttggtgccgg gggaagagtg ggagttcgag gtgacagcct
      781 tctaccgggg ccgccaagtc ttccagcaga ccatctcctg cccggagggc ctgcggctgg
      841 tggggtccga agtgggagac aggacgctgc ctggatggcc agtcacactg ccagaccctg
      901 gcatgtccct gacagacagg ggagtgatga gctacgtgag gcatgtgctg agctgcctgg
      961 gtgggggact ggctctctgg cgggccgggc agtggctctg ggcccagcgg ctggggcact
     1021 gccacacata ctgggcagtg agcgaggagc tgctccccaa cagcgggcat gggcctgatg
     1081 gcgaggtccc caaggacaag gaaggaggcg tgtttgacct ggggcccttc attgtaggct
     1141 cctgggcccc cagatctgat taccttcacg gaaggaagcg gacgctcacc acgctatgcc
     1201 ctctggttct gtgtggggga gtcatggccc caggaccagc cgtggaccaa gaggctcgtg
     1261 atggtcaagg ttgtgcccac gtgcctcagg gccttggtag aaatggcccg ggtagggggt
     1321 gcctcctccc tggagaatac tgtggacctg cacatttcca acagccaccc actctccctc
     1381 acctccgacc agtacaaggc ctacctgcag gacttggtgg agggcatgga tttccagggc
     1441 cctggggaga gctgagccct cgctcctcat ggtgtgcctc caacccccct gttccccacc
     1501 acctcaacca ataaactggt tcctgctatg aaaaaaaaaa aaaaaaaaa
//