LOCUS BC000652 2165 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens signal recognition particle 54kDa, mRNA (cDNA clone
MGC:1610 IMAGE:3343314), complete cds.
ACCESSION BC000652
VERSION BC000652.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2165)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2165)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000652.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: l Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149548.
FEATURES Location/Qualifiers
source 1..2165
/db_xref="H-InvDB:HIT000029807"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1610 IMAGE:3343314"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2165
/gene="SRP54"
/db_xref="GeneID:6729"
/db_xref="HGNC:HGNC:11301"
/db_xref="MIM:604857"
CDS 219..1733
/gene="SRP54"
/codon_start=1
/product="signal recognition particle 54kDa"
/protein_id="AAH00652.1"
/db_xref="GeneID:6729"
/db_xref="HGNC:HGNC:11301"
/db_xref="MIM:604857"
/translation="MVLADLGRKITSALRSLSNATIINEEVLNAMLKEVCTALLEADV
NIKLVKQLRENVKSAIDLEEMASGLNKRKMIQHAVFKELVKLVDPGVKAWTPTKGKQN
VIMFVGLQGSGKTTTCSKLAYYYQRKGWKTCLICADTFRAGAFDQLKQNATKARIPFY
GSYTEMDPVIIASEGVEKFKNENFEIIIVDTSGRHKQEDSLFEEMLQVANAIQPDNIV
YVMDASIGQACEAQAKAFKDKVDVASVIVTKLDGHAKGGGALSAVAATKSPIIFIGTG
EHIDDFEPFKTQPFISKLLGMGDIEGLIDKVNELKLDDNEALIEKLKHGQFTLRDMYE
QFQNIMKMGPFSQILGMIPGFGTDFMSKGNEQESMARLKKLMTIMDSMNDQELDSTDG
AKVFSKQPGRIQRVARGSGVSTRDVQELLTQYTKFAQMVKKMGGIKGLFKGGDMSKNV
SQSQMAKLNQQMAKMMDPRVLHHMGGMAGLQSMMRQFQQGAAGNMKGMMGFNNM"
BASE COUNT 689 a 363 c 489 g 624 t
ORIGIN
1 gctggtggga gttgacgacg tggtgctggg cgttgggacc ctactttatc tagttcggga
61 agttgggttg tggggtcata cctgtctgtc tgctcccagc tttcttgggt ttcttccgac
121 ggcgtggggc ctcgctaagg aattcccggc ccctcagggc cacggcttta gcggtgtctt
181 ttgcgagttc ttcgtaagta catcttaaag ctgtcaagat ggttctagca gaccttggaa
241 gaaaaataac atcagcatta cgctcgttga gcaatgccac cattatcaat gaagaggtat
301 tgaatgctat gctaaaagaa gtctgtaccg ctttgttgga agcagatgtt aatattaaac
361 tagtgaagca actaagagaa aatgttaagt ctgctattga tcttgaagag atggcatctg
421 gtcttaacaa aagaaaaatg attcagcatg ctgtatttaa agaacttgtg aagcttgtag
481 accctggagt taaggcatgg acacccacta aaggaaaaca aaatgtgatt atgtttgttg
541 gattgcaagg gagtggtaaa acaacaacat gttcaaagct agcatattat taccagagga
601 aaggttggaa gacctgttta atatgtgcag acacattcag agcaggggct tttgaccaac
661 taaaacagaa tgctaccaaa gcaagaattc cattttatgg aagctataca gaaatggatc
721 ctgtcatcat tgcttctgaa ggagtagaga aatttaaaaa tgaaaatttt gaaattatta
781 ttgttgatac aagtggccgc cacaaacaag aagactcttt gtttgaagaa atgcttcaag
841 ttgctaatgc tatacaacct gataacattg tttatgtgat ggatgcctcc attgggcagg
901 cttgtgaagc ccaggctaag gcttttaaag ataaagtaga tgtagcctca gtaatagtga
961 caaaacttga tggccatgca aaaggaggtg gtgcactcag tgcagtcgct gccacaaaaa
1021 gtccgattat tttcattggt acaggggaac atatagatga ctttgaacct ttcaaaacac
1081 agccttttat tagcaaactt cttggtatgg gcgacattga aggactgata gataaagtca
1141 acgagttgaa gttggatgac aatgaagcac ttatagagaa gttgaaacat ggtcagttta
1201 cgttgcgaga catgtatgag caatttcaaa atatcatgaa aatgggcccc ttcagtcaga
1261 tcttggggat gatccctggt tttgggacag attttatgag caaaggaaat gaacaggagt
1321 caatggcaag gctaaagaaa ttaatgacaa taatggatag tatgaatgat caagaactag
1381 acagtacgga tggtgccaaa gtttttagta aacaaccagg aagaatccaa agagtagcaa
1441 gaggatcggg tgtatcaaca agagatgttc aagaactttt gacacaatat accaagtttg
1501 cacagatggt aaaaaagatg ggaggtatca aaggactttt caaaggtggc gacatgtcta
1561 agaatgtgag ccagtcacag atggcaaaat tgaaccaaca aatggccaaa atgatggatc
1621 ctagggttct tcatcacatg ggtggtatgg caggacttca gtcaatgatg aggcagtttc
1681 aacagggtgc tgctggcaac atgaaaggca tgatgggatt caataatatg taaagaaaat
1741 gccttaatat aaactgactc agttgaatac ctaatttgct gagacctcag cgtttccctt
1801 ctttttgcga attgggggga aagtgtattt ttcttgctta tcatgcactc tttccttttc
1861 ttctcgcccg cttttcccct ccttttcttt ttccttcctt ctttcctccc tttaatataa
1921 gggagaaata catggttttt gtggaaatca ttatatgttt gctttagatt ttcttctgtt
1981 ttcaccatca taacacttaa gttaaatcat gatgtaaaat tttagtactt aaaggttttt
2041 aattatctcg aaggccaagc attgcatttg taaacagtcc tggtcagtag ttaaataatg
2101 tttcaattaa agtgctgtaa aataaacttc aaagtggtta taagttaaaa aaaaaaaaaa
2161 aaaaa
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