LOCUS BC000645 2110 bp mRNA linear HUM 09-NOV-2006
DEFINITION Homo sapiens solute carrier family 39 (zinc transporter), member 7,
mRNA (cDNA clone MGC:1928 IMAGE:3345970), complete cds.
ACCESSION BC000645
VERSION BC000645.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2110)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2110)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000645.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: h Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5901935.
FEATURES Location/Qualifiers
source 1..2110
/db_xref="H-InvDB:HIT000029801_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1928 IMAGE:3345970"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2110
/gene="SLC39A7"
/gene_synonym="D6S115E"
/gene_synonym="D6S2244E"
/gene_synonym="H2-KE4"
/gene_synonym="KE4"
/gene_synonym="RING5"
/gene_synonym="ZIP7"
/db_xref="GeneID:7922"
/db_xref="HGNC:HGNC:4927"
/db_xref="MIM:601416"
CDS 56..1465
/gene="SLC39A7"
/gene_synonym="D6S115E"
/gene_synonym="D6S2244E"
/gene_synonym="H2-KE4"
/gene_synonym="KE4"
/gene_synonym="RING5"
/gene_synonym="ZIP7"
/codon_start=1
/product="solute carrier family 39 (zinc transporter),
member 7"
/protein_id="AAH00645.1"
/db_xref="GeneID:7922"
/db_xref="HGNC:HGNC:4927"
/db_xref="MIM:601416"
/translation="MARGLGAPHWVAVGLLTWATLGLLVAGLGGHDDLHDDLQEDFHG
HSHRHSHEDFHHGHSHAHGHGHTHESIWHGHTHDHDHGHSHEDLHHGHSHGYSHESLY
HRGHGHDHEHSHGGYGESGAPGIKQDLDAVTLWAYALGATVLISAAPFFVLFLIPVES
NSPRHRSLLQILLSFASGGLLGDAFLHLIPHALEPHSHHTLEQPGHGHSHSGQGPILS
VGLWVLSGIVAFLVVEKFVRHVKGGHGHSHGHGHAHSHTRGSHGHGRQERSTKEKQSS
EEEEKETRGVQKRRGGSTVPKDGPVRPQNAEEEKRGLDLRVSGYLNLAADLAHNFTDG
LAIGASFRGGRGLGILTTMTVLLHEVPHEVGDFAILVQSGCSKKQAMRLQLLTAVGAL
AGTACALLTEGGAVGSEIAGGAGPGWVLPFTAGGFIYVATVSVLPELLREASPLQSLL
EVLGLLGGVIMMVLIAHLE"
BASE COUNT 494 a 520 c 641 g 455 t
ORIGIN
1 gcgggactgc cacgtccaag caaaccggga aaggagagga tcccggagcc gcgtgatggc
61 cagaggcctg ggggcccccc actgggtggc cgtgggactg ctgacctggg cgaccttggg
121 gcttctggtg gctggactcg ggggtcatga cgacctgcac gacgatctgc aagaggactt
181 ccatggccac agccacaggc actcacatga agatttccac catggccaca gccatgccca
241 tggccatggc cacactcacg agagcatctg gcatggacat acccacgatc acgaccatgg
301 acattcacat gaggatttac accatggcca tagccatggc tactcccatg agagcctcta
361 ccacagagga catggacatg accatgagca tagccatgga ggctatgggg agtctggggc
421 tccaggcatc aagcaggacc tggatgctgt cactctctgg gcttatgcac tgggggccac
481 agtgctgatc tcagcagctc cattttttgt cctcttcctt atccccgtgg agtcgaactc
541 tccccggcat cgctctctac ttcagatctt gctcagtttt gcttccggtg ggctcctggg
601 agatgctttc ctgcacctca ttcctcatgc tcttgaacct cattctcacc acactctgga
661 gcaacccgga catggacact cccacagtgg ccagggcccc attctgtctg tgggactgtg
721 ggttctcagt ggaattgttg cctttcttgt cgtggagaaa tttgtgagac atgtgaaagg
781 aggacatggt cacagtcatg gacatggaca cgctcacagt catacacgtg gaagtcatgg
841 acatggaaga caagagcgtt ctaccaagga gaagcagagc tcagaggaag aagaaaagga
901 aacaagaggg gttcagaaga ggcgaggagg gagcacagta cccaaagatg ggccagtgag
961 acctcagaac gctgaagaag aaaaaagagg cttagacctg cgtgtgtcgg ggtacctgaa
1021 tctggctgct gacttggcac acaacttcac tgatggtctg gccattgggg cttcctttcg
1081 agggggccgg ggactaggga tcctgaccac aatgactgtc ctgctacatg aagtgcccca
1141 cgaggtcgga gactttgcca tcttggtcca gtctggctgc agcaaaaagc aggcgatgcg
1201 tctgcaacta ctgacagcag taggggcact ggcaggcaca gcctgtgccc ttctcactga
1261 aggaggagca gtgggcagtg aaattgcagg tggtgcaggt cctggctggg tcctgccatt
1321 tactgcaggt ggctttatct acgtagcaac agtgtctgtg ttgcccgagc tgctgaggga
1381 ggcatcacca ttgcaatcac ttctggaggt gctggggctg ctggggggag ttatcatgat
1441 ggtgctgatt gcccaccttg agtgaggggt ggataaacta cccctgcccc aaacctctac
1501 ccctaactcc aggtcagggg tgcgtagagg ttgggggccc tggccaggga catctgccaa
1561 aggaaggaac tgtagcctgg gagaatggtt actttggcat tagggccttc aagggctggc
1621 agtcttacag aggctggagc ggtgagaatg agaggccaga gggaccatag tgttgggcac
1681 tgtctgacca tgttgcattt ggaaggctaa atggggccat gaagaaggct ggaagggaca
1741 gggggtgatg gcagcctacc tggtgtcccc taccccacct gttctcggag aaccaagttg
1801 ctacacagga agttctccaa ggtccagttt cctttctccc accagttggt ggaggcttca
1861 gggaagacca gagtcctgga cagagagggt aacaggagga gtcggggata aacatcaaac
1921 atcaatcgtg tgtcctgatt tgggagtgat tggggggatg gggtgggaga gggttagttg
1981 gtattctcat ggcctgattt tttttgtttc tattcctttt atatcactgt gtttgaatcg
2041 agggggaggg gtggtaaccg gaaataaaga cctccgatct tccgccccaa aaaaaaaaaa
2101 aaaaaaaaaa
//