LOCUS BC000642 1539 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leptin receptor overlapping transcript-like 1, mRNA
(cDNA clone MGC:1879 IMAGE:3344487), complete cds.
ACCESSION BC000642
VERSION BC000642.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1539)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1539)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000642.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: h Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7662509.
FEATURES Location/Qualifiers
source 1..1539
/db_xref="H-InvDB:HIT000029798"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1879 IMAGE:3344487"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1539
/gene="LEPROTL1"
/gene_synonym="HSPC112"
/gene_synonym="my047"
/db_xref="GeneID:23484"
/db_xref="HGNC:HGNC:6555"
/db_xref="MIM:607338"
CDS 91..486
/gene="LEPROTL1"
/gene_synonym="HSPC112"
/gene_synonym="my047"
/codon_start=1
/product="leptin receptor overlapping transcript-like 1"
/protein_id="AAH00642.1"
/db_xref="GeneID:23484"
/db_xref="HGNC:HGNC:6555"
/db_xref="MIM:607338"
/translation="MAGIKALISLSFGGAIGLMFLMLGCALPIYNKYWPLFVLFFYIL
SPIPYCIARRLVDDTDAMSNACKELAIFLTTGIVVSAFGLPIVFARAHLIEWGACALV
LTGNTVIFATILGFFLVFGSNDDFSWQQW"
BASE COUNT 412 a 277 c 313 g 537 t
ORIGIN
1 gtctggccgc cgtagcgcgt cttgggtctc ccggctgccg ctgctgccgc cgccgcctcg
61 ggtcgtggag ccaggagcga cgtcaccgcc atggcaggca tcaaagcttt gattagtttg
121 tcctttggag gagcaatcgg actgatgttt ttgatgcttg gatgtgccct tccaatatac
181 aacaaatact ggcccctctt tgttctattt ttttacatcc tttcacctat tccatactgc
241 atagcaagaa gattagtgga tgatacagat gctatgagta acgcttgtaa ggaacttgcc
301 atctttctta caacgggcat tgtcgtgtca gcttttggac tccctattgt atttgccaga
361 gcacatctga ttgagtgggg agcttgtgca cttgttctca caggaaacac agtcatcttt
421 gcaactatac taggcttttt cttggtcttt ggaagcaatg acgacttcag ctggcagcag
481 tggtgaaaag aaattactga actattgtca aatggacttc ctgtcatttg ttggccattc
541 acgcacacag gagatggggc agttaatgct gaatggtata gcaagcctct tgggggtatt
601 ttaggtgctc ccttctcact tttattgtaa gcatactatt ttcacagaga cttgctgaag
661 gattaaaagg attttctctt ttggaaaagc ttgactgatt tcacacttat ctatagtatg
721 ctttttgtgg tgtcctgctg aatttaaata tttatgtgtt tttcctgtta ggttgatttt
781 ttttggaatc aatatgcaat gttaaacact tttttaatgt aatcatttgc attggttagg
841 aattcagaat tccgccggct ctattactgg tcaagtacat cttttctctt aaaattattt
901 agcctccatt attacaaaaa attataaaaa taagttttca gtcagtcagg atgacatcac
961 tcccaatgtt atgcagacat acagacggtt ggcatacgtt atagactgta tactcagtgc
1021 aaatatagct gcatttatac ctcagagggg ccaagtgtta atgcccatgc cctccgttaa
1081 gggttgttgg ttttactggt agacagatgt tttgtggatt gaaaattatt ttatggaatt
1141 gctacagagg agtgcttttc ttctcaattg ttagaagaat ttatgttaaa ctttaaggta
1201 agggtgtaaa aacatttttg agataaggtt tttatttatg tttattattg ttagagtgag
1261 ttgcaatgtg ggaagaaatg acattgaaat tccagttttt gaatcctgtt tctatttata
1321 agtgaaattt gtgatctcct atcaaccttt catgttttac cctgttaaaa tggacataca
1381 tggaaccact actgatgagg gacagttgta tgtttgcatc atatatgcca gaaaaccttc
1441 ctctgcttcc tccttttgac ttatttggta tgttgtatat attacataaa ataacttttc
1501 aaatatagtt taataacact taaaaaaaaa aaaaaaaaa
//