LOCUS BC000627 2654 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens signal transducer and activator of transcription 3
(acute-phase response factor), mRNA (cDNA clone MGC:1607
IMAGE:3347434), complete cds.
ACCESSION BC000627
VERSION BC000627.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2654)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2654)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000627.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47458819.
FEATURES Location/Qualifiers
source 1..2654
/db_xref="H-InvDB:HIT000029786"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1607 IMAGE:3347434"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2654
/gene="STAT3"
/gene_synonym="APRF"
/gene_synonym="FLJ20882"
/gene_synonym="MGC16063"
/db_xref="GeneID:6774"
/db_xref="HGNC:HGNC:11364"
/db_xref="MIM:102582"
CDS 138..2447
/gene="STAT3"
/gene_synonym="APRF"
/gene_synonym="FLJ20882"
/gene_synonym="MGC16063"
/codon_start=1
/product="signal transducer and activator of transcription
3 (acute-phase response factor)"
/protein_id="AAH00627.1"
/db_xref="GeneID:6774"
/db_xref="HGNC:HGNC:11364"
/db_xref="MIM:102582"
/translation="MAQWNQLQQLDTRYLEQLHQLYSDSFPMELRQFLAPWIESQDWA
YAASKESHATLVFHNLLGEIDQQYSRFLQESNVLYQHNLRRIKQFLQSRYLEKPMEIA
RIVARCLWEESRLLQTAATAAQQGGQANHPTAAVVTEKQQMLEQHLQDVRKRVQDLEQ
KMKVVENLQDDFDFNYKTLKSQGDMQDLNGNNQSVTRQKMQQLEQMLTALDQMRRSIV
SELAGLLSAMEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQ
TRQQIKKLEELQQKVSYKGDPIVQHRPMLEERIVELFRNLMKSAFVVERQPCMPMHPD
RPLVIKTGVQFTTKVRLLVKFPELNYQLKIKVCIDKDSGDVAALRGSRKFNILGTNTK
VMNMEESNNGSLSAEFKHLTLREQRCGNGGRANCDASLIVTEELHLITFETEVYHQGL
KIDLETHSLPVVVISNICQMPNAWASILWYNMLTNNPKNVNFFTKPPIGTWDQVAEVL
SWQFSSTTKRGLSIEQLTTLAEKLLGPGVNYSGCQITWAKFCKENMAGKGFSFWVWLD
NIIDLVKKYILALWNEGYIMGFISKERERAILSTKPPGTFLLRFSESSKEGGVTFTWV
EKDISGKTQIQSVEPYTKQQLNNMSFAEIIMGYKIMDATNILVSPLVYLYPDIPKEEA
FGKYCRPESQEHPEADPGAAPYLKTKFICVTPTTCSNTIDLPMSPRTLDSLMQFGNNG
EGAEPSAGGQFESLTFDMELTSECATSPM"
BASE COUNT 727 a 678 c 689 g 560 t
ORIGIN
1 ggatcctgga caggcacccc ggcttggcgc tgtctctccc cctcggctcg gagaggccct
61 tcggcctgag ggagcctcgc cgcccgtccc cggcacacgc gcagccccgg cctctcggcc
121 tctgccggag aaacaggatg gcccaatgga atcagctaca gcagcttgac acacggtacc
181 tggagcagct ccatcagctc tacagtgaca gcttcccaat ggagctgcgg cagtttctgg
241 ccccttggat tgagagtcaa gattgggcat atgcggccag caaagaatca catgccactt
301 tggtgtttca taatctcctg ggagagattg accagcagta tagccgcttc ctgcaagagt
361 cgaatgttct ctatcagcac aatctacgaa gaatcaagca gtttcttcag agcaggtatc
421 ttgagaagcc aatggagatt gcccggattg tggcccggtg cctgtgggaa gaatcacgcc
481 ttctacagac tgcagccact gcggcccagc aagggggcca ggccaaccac cccacagcag
541 ccgtggtgac ggagaagcag cagatgctgg agcagcacct tcaggatgtc cggaagagag
601 tgcaggatct agaacagaaa atgaaagtgg tagagaatct ccaggatgac tttgatttca
661 actataaaac cctcaagagt caaggagaca tgcaagatct gaatggaaac aaccagtcag
721 tgaccaggca gaagatgcag cagctggaac agatgctcac tgcgctggac cagatgcgga
781 gaagcatcgt gagtgagctg gcggggcttt tgtcagcgat ggagtacgtg cagaaaactc
841 tcacggacga ggagctggct gactggaaga ggcggcaaca gattgcctgc attggaggcc
901 cgcccaacat ctgcctagat cggctagaaa actggataac gtcattagca gaatctcaac
961 ttcagacccg tcaacaaatt aagaaactgg aggagttgca gcaaaaagtt tcctacaaag
1021 gggaccccat tgtacagcac cggccgatgc tggaggagag aatcgtggag ctgtttagaa
1081 acttaatgaa aagtgccttt gtggtggagc ggcagccctg catgcccatg catcctgacc
1141 ggcccctcgt catcaagacc ggcgtccagt tcactactaa agtcaggttg ctggtcaaat
1201 tccctgagtt gaattatcag cttaaaatta aagtgtgcat tgacaaagac tctggggacg
1261 ttgcagctct cagaggatcc cggaaattta acattctggg cacaaacaca aaagtgatga
1321 acatggaaga atccaacaac ggcagcctct ctgcagaatt caaacacttg accctgaggg
1381 agcagagatg tgggaatggg ggccgagcca attgtgatgc ttccctgatt gtgactgagg
1441 agctgcacct gatcaccttt gagaccgagg tgtatcacca aggcctcaag attgacctag
1501 agacccactc cttgccagtt gtggtgatct ccaacatctg tcagatgcca aatgcctggg
1561 cgtccatcct gtggtacaac atgctgacca acaatcccaa gaatgtaaac ttttttacca
1621 agcccccaat tggaacctgg gatcaagtgg ccgaggtcct gagctggcag ttctcctcca
1681 ccaccaagcg aggactgagc atcgagcagc tgactacact ggcagagaaa ctcttgggac
1741 ctggtgtgaa ttattcaggg tgtcagatca catgggctaa attttgcaaa gaaaacatgg
1801 ctggcaaggg cttctccttc tgggtctggc tggacaatat cattgacctt gtgaaaaagt
1861 acatcctggc cctttggaac gaagggtaca tcatgggctt tatcagtaag gagcgggagc
1921 gggccatctt gagcactaag cctccaggca ccttcctgct aagattcagt gaaagcagca
1981 aagaaggagg cgtcactttc acttgggtgg agaaggacat cagcggtaag acccagatcc
2041 agtccgtgga accatacaca aagcagcagc tgaacaacat gtcatttgct gaaatcatca
2101 tgggctataa gatcatggat gctaccaata tcctggtgtc tccactggtc tatctctatc
2161 ctgacattcc caaggaggag gcattcggaa agtattgtcg gccagagagc caggagcatc
2221 ctgaagctga cccaggcgct gccccatacc tgaagaccaa gtttatctgt gtgacaccaa
2281 cgacctgcag caataccatt gacctgccga tgtccccccg cactttagat tcattgatgc
2341 agtttggaaa taatggtgaa ggtgctgaac cctcagcagg agggcagttt gagtccctca
2401 cctttgacat ggagttgacc tcggagtgcg ctacctcccc catgtgagga gctgagaacg
2461 gaagctgcag aaagatacga ctgaggcgcc tacctgcatt ctgccacccc tcacacagcc
2521 aaaccccaga tcatctgaaa ctactaactt tgtggttcca gatttttttt aatctcctac
2581 ttctgctatc tttgagcaat ctgggcactt ttaaaaatag agaaatgagt gaaaaaaaaa
2641 aaaaaaaaaa aaaa
//