LOCUS BC000595 2482 bp mRNA linear HUM 13-SEP-2007
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 17, mRNA (cDNA
clone MGC:2030 IMAGE:3345982), complete cds.
ACCESSION BC000595
VERSION BC000595.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2482)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2482)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000595.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 38201709.
FEATURES Location/Qualifiers
source 1..2482
/db_xref="H-InvDB:HIT000029762"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2030 IMAGE:3345982"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2482
/gene="DDX17"
/gene_synonym="P72"
/gene_synonym="RH70"
/db_xref="GeneID:10521"
/db_xref="HGNC:HGNC:2740"
/db_xref="MIM:608469"
CDS 51..2240
/gene="DDX17"
/gene_synonym="P72"
/gene_synonym="RH70"
/note="alternative start codon"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
/protein_id="AAH00595.2"
/db_xref="GeneID:10521"
/db_xref="HGNC:HGNC:2740"
/db_xref="MIM:608469"
/translation="MPTGFVAPILCVLLPSPTREAATVASATGDSASERESAAPAAAP
TAEAPPPSVVTRPEPQALPSPAIRAPLPDLYPFGTMRGGGFGDRDRDRDRGGFGARGG
GGLPPKKFGNPGERLRKKKWDLSELPKFEKNFYVEHPEVARLTPYEVDELRRKKEITV
RGGDVCPKPVFAFHHANFPQYVMDVLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTG
SGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKST
CIYGGAPKGPQIRDLERGVEICIATPGRLIDFLESGKTNLRRCTYLVLDEADRMLDMG
FEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQ
IVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVETKRRCDDLTRRMRRDGWPAMCIHG
DKSQPERDWVLNEFRSGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYVHRIGR
TARSTNKGTAYTFFTPGNLKQARELIKVLEEANQAINPKLMQLVDHRGGGGGGGGRSR
YRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNS
AFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGI
GRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSRK"
BASE COUNT 647 a 593 c 650 g 592 t
ORIGIN
1 ggaaggagac gcctaaaccg cggcactgcc cggtttgagc gtagccaaac ctgcccaccg
61 gctttgtagc cccgattctc tgtgttttgc tcccgtctcc gacgagagag gcggcgacgg
121 tggcgtctgc gacgggagac agcgcgtcgg agcgagagag cgctgcgcct gccgccgccc
181 caacagcgga ggcgccgccg ccatcggtcg tcaccagacc ggagccgcag gccctcccga
241 gcccggccat ccgtgccccg ctcccagatc tctatccttt tgggaccatg cgcggaggag
301 gctttgggga ccgggaccgg gatcgtgacc gtggaggatt tggagcaaga ggtggtggtg
361 gccttccccc gaagaaattt ggtaatcctg gggagcgttt gcgtaaaaaa aagtgggatt
421 tgagtgagct ccccaagttt gagaaaaatt tttatgtgga acatccggaa gtagcaaggc
481 tgacaccata tgaggttgat gagctacgcc gaaagaagga gattacagtg agggggggag
541 atgtttgtcc taaacccgtg tttgccttcc atcatgctaa cttcccacaa tatgtaatgg
601 atgtgttgat ggatcagcac tttacagaac caactccaat tcagtgccag ggatttccgt
661 tggctcttag tggccgggat atggtgggca ttgctcagac tggctctggg aagacgttgg
721 cgtatctcct gcctgcaatt gttcatatta accaccagcc atacttggaa aggggagatg
781 gcccaatctg tctagttctg gctcctacca gagagcttgc ccagcaagta cagcaggtgg
841 ccgatgacta tggcaaatgt tctagattga agagtacttg tatttatgga ggtgctccta
901 aaggtcccca gattcgagac ttggaaagag gtgttgagat ctgcatagcc actcctggac
961 gtctgataga tttcctggag tcaggaaaga caaatcttcg ccgatgtact taccttgtat
1021 tggacgaagc tgacagaatg cttgatatgg ggtttgaacc ccagatccgt aaaattgttg
1081 accaaatcag gcctgatagg cagacactga tgtggagtgc aacctggcca aaagaagtaa
1141 gacagcttgc agaggatttc cttcgtgatt acacccagat caacgtaggc aatctggagt
1201 tgagtgccaa ccacaacatc ctccagatag tggatgtctg catggaaagt gaaaaagacc
1261 acaagttgat ccaactaatg gaagaaataa tggctgaaaa ggaaaacaaa acaataatat
1321 ttgtggagac aaagagacgc tgtgatgatc tgactcgaag gatgcgcaga gatggttggc
1381 cagctatgtg tatccatgga gacaagagtc aaccagaaag agattgggta cttaatgagt
1441 tccgttctgg aaaggcaccc atccttattg ctacagatgt agcctcccgt gggctagatg
1501 tggaagatgt caagtttgtg atcaactatg actatccaaa cagctcagag gattatgtgc
1561 accgtattgg ccgaacagcc cgtagcacca acaagggtac cgcctatacc ttcttcaccc
1621 cagggaacct aaaacaggcc agagagctta tcaaagtgct ggaagaggcc aatcaggcta
1681 tcaatccaaa actgatgcag cttgtggacc acagaggagg cggcggaggc gggggtggtc
1741 gttctcgtta ccggaccact tcttcagcca acaatcccaa tctgatgtat caggatgagt
1801 gtgaccgaag gcttcgagga gtcaaggatg gtggccggag agactctgca agctatcggg
1861 atcgtagtga aaccgataga gctggttatg ctaatggcag tggctatgga agtccaaatt
1921 ctgcctttgg agcacaagca ggccaataca cctatggtca aggcacctat ggggcagctg
1981 cttatggcac cagtagctat acagctcaag aatatggtgc tggcacttat ggagctagta
2041 gcaccacctc aactgggaga agttcacaga gctctagcca gcagtttagt gggataggcc
2101 ggtctgggca gcagccacag ccactgatgt cacaacagtt tgcacagcct ccgggagcta
2161 ccaatatgat aggttacatg gggcagactg cctaccaata ccctcctcct cctccccctc
2221 ctcctccttc acgtaaatga aaccactcaa gtggtagtga ctccagcaga cttaattaca
2281 ttttaaggaa cactgtcttt cctttttttt cctcttcgcc ttttcttttt ttttcctttt
2341 ttcttttttt tttttaattt ttccccccaa ccatcgtgat ttgtcttttc atgcagatta
2401 gttagaattc actgccaggt ttcttctgcc caccaaaatg atccagtctg gaataacatt
2461 ttgtaaaaaa aaaaaaaaaa aa
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