LOCUS BC000584 1541 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens scavenger receptor class F, member 2, mRNA (cDNA clone
IMAGE:3163559), partial cds.
ACCESSION BC000584
VERSION BC000584.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1541)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1541)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000584.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: o Column: 17.
FEATURES Location/Qualifiers
source 1..1541
/db_xref="H-InvDB:HIT000085848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3163559"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1541
/gene="SCARF2"
/gene_synonym="SREC-II"
/gene_synonym="SREC2"
/gene_synonym="SRECRP-1"
/db_xref="GeneID:91179"
CDS <1..732
/gene="SCARF2"
/gene_synonym="SREC-II"
/gene_synonym="SREC2"
/gene_synonym="SRECRP-1"
/codon_start=1
/product="SCARF2 protein"
/protein_id="AAH00584.2"
/db_xref="GeneID:91179"
/translation="PTTTWITHSTAASRGEIGGLSLSPSPERRKPPPPDPATKPKVSW
IHGKHSAAAAGRAPSPPPPGSEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPG
LPEEATALAAPSPPRARARGRGPGLLEPTDAGGPPRSAPEAASMLAAELRGKTRSLGR
AEVALGAQGPREKPAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPRKKT
PIQKPPRKKSREAAGELGRAGAPTL"
BASE COUNT 249 a 595 c 483 g 214 t
ORIGIN
1 cccaccacga cctggataac acactcaact gcagcttccc ggggcgagat tgggggcctg
61 tcgctgtcgc catcgcccga gcgcaggaaa ccgccgccac ctgaccccgc caccaagcct
121 aaggtgtcct ggatccacgg caagcacagc gccgctgcag ctggccgtgc gccctcacca
181 ccgccgccag gctccgaggc cgcgcccagc cccagcaaga ggaaacggac gcccagcgac
241 aaatcggcgc atacggtcga acacggcagc ccccggaccc gcgacccaac gccgcggccc
301 cccgggctgc ccgaggaggc gacagccctc gctgcgccct cgccgcccag ggcccgagcg
361 cggggccgcg gccccggcct cttggagccc acggacgccg gcggtccccc gcgaagcgcg
421 cccgaggctg cctccatgtt ggccgctgag ctgcgcggca agactcgcag cctgggccgc
481 gccgaggtgg ccctgggcgc gcagggcccc agggaaaagc cggcgccccc acagaaagcc
541 aagcgctccg tgccgccagc ctcgcccgcc cgcgcgcccc cagcgaccga aaccccgggg
601 cctgagaagg cggcgaccga cttgcccgcg cctgagaccc cccggaagaa gacccccatc
661 cagaagccgc cgcgcaagaa gagccgggag gcggcgggcg agctgggcag ggcgggcgca
721 cccaccctgt agcaggctgt ggctcgtccg cgcgcagctc cctcagcttc gcagcgccgc
781 ccgccacccc acacctccca cgctaccggg cacgggcggc ctcctattgg ccgggcaccg
841 cgcggctagc ggaggttgcg tctcattggc tcaggtcctg cagccgctcc tggattggag
901 cagtgtgctc tggcgggaag ggcccatccc gttggtcgag gcctgacagg cgcttagcgg
961 gcgactccct ccccattggc cgagttatgg agcgctccga ccagacagcg tctcattggc
1021 caaagatggg agggttccgc ttaaagaccg cctcttactg gccaggagtg gacttggtta
1081 gggctacctt ctcattggtt gcagccagag gcacttctgc ccgggctgcc tctcccccgc
1141 tagggcctgg tgcctctggc tggaggctcc ctcccttggc cgtcccaata gagcccgggg
1201 ctacttccac tggccaggct cccgggcatc tggttgaccc cagcctgggg aggagggctg
1261 gtctccgctc ctcaggggct tagtccgtcc caccccttcc cttccctggc gccccgggcc
1321 caggcccctc agctgtcagc tggttttgat ggcctcccac tgccccacac gccgcgggac
1381 ctccaggggc gactctagtg gcctgaggag atgtatttat aggcccccag cagggctgct
1441 cccccctcgg ccggtgcccc aggatgggct cctcccggcg ggggcttggc caaagctttc
1501 ttaataaaat gcctttcccc tcaaaaaaaa aaaaaaaaaa a
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