LOCUS BC000582 1524 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens protein O-fucosyltransferase 1, mRNA (cDNA clone
MGC:2482 IMAGE:3162533), complete cds.
ACCESSION BC000582
VERSION BC000582.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1524)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1524)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC000582.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 27436890.
FEATURES Location/Qualifiers
source 1..1524
/db_xref="H-InvDB:HIT000029750"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2482 IMAGE:3162533"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1524
/gene="POFUT1"
/gene_synonym="FUT12"
/gene_synonym="KIAA0180"
/gene_synonym="MGC2482"
/gene_synonym="O-Fuc-T"
/gene_synonym="O-FucT-1"
/gene_synonym="O-FUT"
/db_xref="GeneID:23509"
/db_xref="HGNC:HGNC:14988"
/db_xref="MIM:607491"
CDS 50..634
/gene="POFUT1"
/gene_synonym="FUT12"
/gene_synonym="KIAA0180"
/gene_synonym="MGC2482"
/gene_synonym="O-Fuc-T"
/gene_synonym="O-FucT-1"
/gene_synonym="O-FUT"
/codon_start=1
/product="protein O-fucosyltransferase 1"
/protein_id="AAH00582.1"
/db_xref="GeneID:23509"
/db_xref="HGNC:HGNC:14988"
/db_xref="MIM:607491"
/translation="MGAAAWARPLSVSFLLLLLPLPGMPAGSWDPAGYLLYCPCMGRF
GNQADHFLGSLAFAKLLNRTLAVPPWIEYQHHKPPFTNLHVSYQKYFKLEPLQAYHRV
ISLEDFMEKLAPTHWPPEKRVAYCFEVAAQRSPDKKTCPMKEGNPFGPFWDQFHVSFN
KSELFTGISFSASYREQWSQRRENHSCVTLLFPR"
BASE COUNT 392 a 364 c 394 g 374 t
ORIGIN
1 cttccctccc cgactgtgcg ccgcggctgg ctcgggttcc cgggccgaca tgggcgccgc
61 cgcgtgggca cggccgctga gcgtgtcttt cctgctgctg cttctgccgc tcccggggat
121 gcctgcgggc tcctgggacc cggccggtta cctgctctac tgcccctgca tggggcgctt
181 tgggaaccag gccgatcact tcttgggctc tctggcattt gcaaagctgc taaaccgtac
241 cttggctgtc cctccttgga ttgagtacca gcatcacaag cctcctttca ccaacctcca
301 tgtgtcctac cagaagtact tcaagctgga gcccctccag gcttaccatc gggtcatcag
361 cttggaggat ttcatggaga agctggcacc cacccactgg ccccctgaga agcgggtggc
421 atactgcttt gaggtggcag cccagcgaag cccagataag aagacgtgcc ccatgaagga
481 aggaaacccc tttggcccat tctgggatca gtttcatgtg agtttcaaca agtcggagct
541 ttttacaggc atttccttca gtgcttccta cagagaacaa tggagccaga ggcgtgagaa
601 tcactcctgt gttaccttac tcttcccaag gtgaaactgg aagcagcttc tagagaacag
661 cttcaggtgc agaccgagaa atgacgtcat cctgataatt attggacgtg tttattaatt
721 gcaccccatt agcccctgtt tttaaaaaat ataggttagc aggacgtggg cacaggccgt
781 gaaacattta tagggcgcct gtcacgtgtg agacatagta atcagaggcc aatggtgatg
841 tgtgaaaatg aggatgacca gctctggttt tctaggagct atggtctcat aatgacaata
901 atcagcatag tgtacttgtc cttaatgtta tagcatggca ggaaagacca tgggcttaga
961 aggcagacat tggttaggag gtgcagggaa catactaatt catgtgcggt caaagcactt
1021 ggcatttaat agggcaaagg taaacagatg tagagaaatg agtctcatgc ctgtaatccc
1081 agcactttgg gaggccaagg tgggtggatc acttgagcct aagagatcaa ggctgcagtg
1141 agccatgatg gtacccctgc actccagccc aggttacaga gcaagggcct gtctcagcaa
1201 aacaaaacaa gcacaggcca aggagtgaga tagccagcgc tgatggtatc tgcctcgtag
1261 tgcatgaagt gcatgtcata cactaagcag ccagccagtg ttggctgtca gtgttattac
1321 tcacatgctt tattttattt aagactttga gatagttcat gaagtgggta ttattatcaa
1381 tttccatttt ataggtgagg aaactgagcc cagtgaagtt aaataacttc ccaaggtcat
1441 tgagctgttg agtggacagc tcaggtctgt ttgtaaatct ttaataaata acaacagcta
1501 agattcaaaa aaaaaaaaaa aaaa
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