LOCUS BC000581 761 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens selenoprotein W, 1, mRNA (cDNA clone MGC:1621
IMAGE:3162433), complete cds.
ACCESSION BC000581
VERSION BC000581.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 761)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 761)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC000581.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: o Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 42544245.
FEATURES Location/Qualifiers
source 1..761
/db_xref="H-InvDB:HIT000085847"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1621 IMAGE:3162433"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..761
/gene="SEPW1"
/gene_synonym="selW"
/db_xref="GeneID:6415"
/db_xref="HGNC:HGNC:10752"
/db_xref="MIM:603235"
CDS 67..330
/gene="SEPW1"
/gene_synonym="selW"
/codon_start=1
/transl_except=(pos:103..105,aa:Sec)
/product="selenoprotein W, 1"
/protein_id="AAH00581.1"
/db_xref="GeneID:6415"
/db_xref="HGNC:HGNC:10752"
/db_xref="MIM:603235"
/translation="MALAVRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDICGEGTPQA
TGFFEVMVAGKLIHSKKKGDGYVDTESKFLKLVAAIKAALAQG"
BASE COUNT 167 a 202 c 215 g 177 t
ORIGIN
1 gcgtccaggt gggaggttag tgtggcccgg gcgtccgctc ctcagcggat gtggcagccc
61 cgagccatgg ctctcgccgt ccgagtcgtt tattgtggcg cttgaggcta caagtccaag
121 tatcttcagc tcaagaagaa gttagaagat gagttccccg gccgcctgga catctgcggc
181 gagggaactc cccaggccac cgggttcttt gaagtgatgg tagccgggaa gttgattcac
241 tctaagaaga aaggcgatgg ctacgtggac acagaaagca agtttctgaa gttggtggcc
301 gccatcaaag ccgccttggc tcagggctaa tgcgccctga aggcagagtc cagggacctt
361 gacccagccc ctctcagcag acgcttcatg ataggaagga ctgaaaagtc ttgtggacac
421 ctggtctttc cctgatgttc tcgtggctgc tgttgggggc agagattgac gcccccggtc
481 tttgcctctg agcgggagag tctgtgtgta tgtgtcttcc ccggaatcca caccacccca
541 ccctcctcct gtcccgtggt ttcatcatat ctctttgcat accccatgtc ttccccagtt
601 gtcccctgga gtttgggggg acatcccgcc tcaggcatcc ttctcaaggg gaagccaaga
661 gaggcatcag gatgggtggg tttctgattg tggcaacgtt tgcaaccgtt cacgattcaa
721 taaatattgg atgaatttaa ccgaaaaaaa aaaaaaaaaa a
//