LOCUS BC000574 1528 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens procollagen C-endopeptidase enhancer, mRNA (cDNA clone
MGC:1830 IMAGE:3163857), complete cds.
ACCESSION BC000574
VERSION BC000574.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1528)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1528)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000574.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: k Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7262388.
FEATURES Location/Qualifiers
source 1..1528
/db_xref="H-InvDB:HIT000029745"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1830 IMAGE:3163857"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1528
/gene="PCOLCE"
/gene_synonym="PCPE"
/db_xref="GeneID:5118"
/db_xref="HGNC:HGNC:8738"
/db_xref="MIM:600270"
CDS 92..1441
/gene="PCOLCE"
/gene_synonym="PCPE"
/codon_start=1
/product="procollagen C-endopeptidase enhancer"
/protein_id="AAH00574.1"
/db_xref="GeneID:5118"
/db_xref="HGNC:HGNC:8738"
/db_xref="MIM:600270"
/translation="MLPAATASLLGPLLTACALLPFAQGQTPNYTRPVFLCGGDVKGE
SGYVASEGFPNLYPPNKECIWTITVPEGQTVSLSFRVFDLELHPACRYDALEVFAGSG
TSGQRLGRFCGTFRPAPLVAPGNQVTLRMTTDEGTGGRGFLLWYSGRATSGTEHQFCG
GRLEKAQGTLTTPNWPESDYPPGISCSWHIIAPPDQVIALTFEKFDLEPDTYCRYDSV
SVFNGAVSDDSRRLGKFCGDAVPGSISSEGNELLVQFVSDLSVTADGFSASYKTLPRG
TAKEGQGPGPKRGTEPKVKLPPKSQPPEKTEESPSAPDAPTCPKQCRRTGTLQSNFCA
SSLVVTATVKSMVREPGEGLAVTVSLIGAYKTGGLDLPSPPTGASLKFYVPCKQCPPM
KKGVSYLLMGQVEENRGPVLPPESFVVLHRPNQDQILTNLSKRKCPSQPVRAAASQD"
BASE COUNT 303 a 512 c 424 g 289 t
ORIGIN
1 tatcctgctg ctgccgccac cgctgctgct gctctgcaaa attcagctgc tgcctctgtc
61 ttgaggaccc cagcgccttt cccccggggc catgctgcct gcagccacag cctccctcct
121 ggggcccctc ctcactgcct gcgccctgct gccttttgcc cagggccaga cccccaacta
181 caccagaccc gtgttcctgt gcggagggga tgtgaagggg gaatcaggtt acgtggcaag
241 tgaggggttc cccaacctct acccccctaa taaggagtgc atctggacca taacggtccc
301 cgagggccag actgtgtccc tctcattccg agtcttcgac ctggagctgc accccgcctg
361 ccgctacgat gctctggagg tcttcgctgg gtctgggact tccggccagc ggctcggacg
421 cttttgtggg accttccggc ctgcgcccct agtcgccccc ggcaaccagg tgaccctgag
481 gatgacgacg gatgagggca caggaggacg aggcttcctg ctctggtaca gcgggcgggc
541 cacctcgggc actgagcacc aattttgcgg ggggcggctg gagaaggccc agggaaccct
601 gaccacgccc aactggcccg agtccgatta ccccccgggc atcagctgtt cctggcacat
661 catcgcgccc ccggaccagg tcatcgcgct gaccttcgag aagtttgacc tggagccgga
721 cacctactgc cgctatgact cggtcagcgt gttcaacgga gccgtgagcg acgactcccg
781 gaggctgggg aagttctgcg gcgacgcagt cccgggctcc atctcctccg aagggaatga
841 actcctcgtc cagttcgtct cagatctcag tgtcaccgct gatggcttct cagcctccta
901 caagaccctg ccgcggggca ctgccaaaga agggcaaggg cccggcccca aacggggaac
961 tgagcctaaa gtcaagctgc cccccaagtc ccaacctccg gagaaaacag aggaatctcc
1021 ttcagcccct gatgcaccca cctgcccaaa gcagtgccgc cggacaggca ccttgcagag
1081 caacttctgt gccagcagcc ttgtggtgac tgcgacagtg aagtccatgg ttcgggagcc
1141 aggggagggc cttgccgtga ctgtcagtct tattggtgct tataaaactg gaggactgga
1201 cctgccttct ccacccactg gtgcctccct gaagttttac gtgccttgca agcagtgccc
1261 ccccatgaag aaaggagtca gttatctgct gatgggccag gtagaagaga acagaggccc
1321 cgtccttcct ccagagagct ttgtggttct ccaccggccc aaccaggacc agatcctcac
1381 caacctaagc aagaggaagt gcccctctca acctgtgcgg gctgctgcgt cccaggactg
1441 agacgcaggc cagccccggc ccctagccct caggccttct ttcttatcca aataaatgtt
1501 tcttaatgag aaaaaaaaaa aaaaaaaa
//