LOCUS BC000564 1929 bp mRNA linear HUM 16-SEP-2003
DEFINITION Homo sapiens BTB (POZ) domain containing 2, mRNA (cDNA clone
IMAGE:3162813), partial cds.
ACCESSION BC000564
VERSION BC000564.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1929)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1929)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000564.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127579.
FEATURES Location/Qualifiers
source 1..1929
/db_xref="H-InvDB:HIT000029738"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3162813"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1929
/gene="BTBD2"
/gene_synonym="FLJ20386"
/db_xref="GeneID:55643"
CDS <1..868
/gene="BTBD2"
/gene_synonym="FLJ20386"
/codon_start=2
/product="BTBD2 protein"
/protein_id="AAH00564.2"
/db_xref="GeneID:55643"
/translation="ASLCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVR
LFNAVVRWSEAECQRQQLQVTPENRRKVLGKALGLIRFPLMTIEEFAAGPAQSGILVD
REVVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSV
NKRIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKE
PVEVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSV
EDGQIPEVIFYT"
BASE COUNT 357 a 672 c 561 g 339 t
ORIGIN
1 ggccagcctg tgcctggaga acatcgacaa aaacactgca gacgccatca ccgcggaggg
61 cttcaccgac attgacctgg acacgctggt ggctgtcctg gagcgcgaca cactgggcat
121 ccgtgaggtg cggctgttca atgccgttgt ccgctggtcc gaggccgagt gtcagcggca
181 gcagctgcag gtgacgccag agaacaggcg gaaggttctg ggcaaggccc tgggcctcat
241 tcgcttcccg ctcatgacca tcgaggagtt cgctgcaggt cccgcacagt cgggcatcct
301 ggtggaccgc gaggtggtca gcctcttcct gcacttcacc gtcaacccca agccacgagt
361 ggagttcatt gaccggcccc gctgctgcct gcgtgggaag gagtgcagca tcaaccgctt
421 ccagcaggtg gagagtcgct ggggctacag cgggaccagt gaccgcatca ggttctcagt
481 caacaagcgc atcttcgtgg tgggatttgg gctgtatgga tccatccacg ggcccaccga
541 ctaccaagtg aacatccaga ttattcacac cgatagcaac accgtcttgg gccagaacga
601 cacgggcttc agctgcgacg gctcagccag caccttccgc gtcatgttca aggagccggt
661 ggaggtgctg cccaacgtca actacacggc ctgtgccacg ctcaagggcc cagactccca
721 ctacggcacc aaaggcctgc gcaaggtgac acacgagtcg cccaccacgg gcgccaagac
781 ctgcttcacc ttttgctacg cggccgggaa caacaatggc acatccgtgg aggacggcca
841 gatccccgag gtcatcttct acacctaggc tgcccgacac cgacaccgcc ctccctccgt
901 ggggatagcc gcagccccag gccatcatct gctgctgggg cccccccacc acgcggtgcc
961 aggcccagtg tcccccaggc cgtctgtcca ctccatgcca cctttctcag catcaggacg
1021 gggttgccct gtgttcacca cgagtgtggc tgctggatca gggcagccgg ggaggtggcc
1081 aggccagtgg ccaggccctg tggagacaat ccctcaggac tagggacagg gctgtgccgg
1141 cctgggccag ggcccacgga cccgcagctc agggcgcctg cccacgtcgt ctgccggcgg
1201 tgcgccgcgg gcgtccctcg cgtctcttca ctgcacattg caatgcattt gcgattccca
1261 tttctctgct aggagccagc ctgggtggcg ctgctcccag agccatgggt cccagacctt
1321 gcgttccttt tgttcctgtc cgtttatcag gacacgggcc ccacctgtca cgtgcccgag
1381 gccacccaag cccagcctgc ggggcgttcc cactgcctgg atgccggctt gagttctgcg
1441 cacgcaggat tcagtgtggg gacggcccct gccggatagg cctagccctg gcccaggtgg
1501 tgagcggttt gcagtgtccg ttctcatcca cctgatgggc ccagataaag gcccccgctg
1561 tccagcctcc ctggacggcc ctcgcggtcc ctgcagccca agatgggact cagaccctgt
1621 gccccagagc tcccctgccg cagaatgggg ccccagccgg ccccgaccgg gtccaggagc
1681 actgctcgcc tgtacatact gttgccctag cccacctggt gccgtgggag ccacccccag
1741 gtgctggggg cacagcccct ccccactccg gccacgcccc cacccacccc gcgtgtttct
1801 gccctgtgac tcctggaacc tgcgtcctcc ccaaagccat gggaggggtg tcctcctcag
1861 accatgcccc cagatgattt ttttaaataa agaaacaaat gcacctgcaa aaaaaaaaaa
1921 aaaaaaaaa
//