LOCUS BC000543 2053 bp mRNA linear HUM 29-AUG-2008
DEFINITION Homo sapiens peroxisomal biogenesis factor 10, mRNA (cDNA clone
MGC:1998 IMAGE:3163782), complete cds.
ACCESSION BC000543
VERSION BC000543.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2053)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2053)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 8, 2003 this sequence version replaced BC000543.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 5 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24797087.
FEATURES Location/Qualifiers
source 1..2053
/db_xref="H-InvDB:HIT000029722"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1998 IMAGE:3163782"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2053
/gene="PEX10"
/gene_synonym="NALD"
/gene_synonym="RNF69"
/db_xref="GeneID:5192"
/db_xref="HGNC:HGNC:8851"
/db_xref="MIM:602859"
CDS 29..1069
/gene="PEX10"
/gene_synonym="NALD"
/gene_synonym="RNF69"
/codon_start=1
/product="peroxisomal biogenesis factor 10"
/protein_id="AAH00543.1"
/db_xref="GeneID:5192"
/db_xref="HGNC:HGNC:8851"
/db_xref="MIM:602859"
/translation="MAPAAASPPEVIRAAQKDEYYRGGLRSAAGGALHSLAGARKWLE
WRKEVELLSDVAYFGLTTLAGYQTLGEEYVSIIQVDPSRIHVPSSLRRGVLVTLHAVL
PYLLDKALLPLEQELQADPDSGRPLQGSLGPGGRGCSGARRWMRHHTATLTEQQRRAL
LRAVFVLRQGLACLQRLHVAWFYIHGVFYHLAKRLTGITYQALRPDPLRVLMSVAPSA
LQLRVRSLPGEDLRARVSYRLLGVISLLHLVLSMGLQLYGFRQRQRARKEWRLHRGLS
HRRASLEERAVSRNPLCTLCLEERRHPTATPCGHLFCWECITAWCSSKAECPLCREKF
PPQKLIYLRHYR"
BASE COUNT 414 a 631 c 621 g 387 t
ORIGIN
1 ctgctcggga ccacccgaac ccgcggccat ggccccggcc gccgccagcc ccccggaggt
61 gatccgcgcg gcgcagaagg acgagtacta ccgcggtggg ctgcggagcg cggcgggcgg
121 cgccctgcac agcctggcgg gtgcgaggaa gtggctggag tggaggaagg aggttgagct
181 gctctcagat gtggcctact ttggcctcac cacacttgca ggctaccaga ccctggggga
241 ggagtacgtc agcatcatcc aggtggaccc atcgcggata catgtgccct cctcgctgcg
301 ccgtggcgtg ctggtgacgc tgcatgccgt cctgccctac ctgctggaca aggccctgct
361 ccccctggag caggagctgc aggctgaccc cgacagtggg cgacccttgc aggggagcct
421 ggggccaggt gggcgtggct gctcaggggc gcggcgctgg atgcgtcacc acacggccac
481 cctgactgag cagcagagga gggcgctgct gcgggcggtc ttcgtcctca gacagggcct
541 cgcctgcctc cagcggctac atgttgcctg gttttacatc cacggtgtct tctaccacct
601 ggccaagagg ctcacgggga tcacgtacca ggcgctgagg ccagatcccc tcagggtcct
661 gatgagtgtg gcgccatctg ccttacagct ccgtgtccgc agcctgcccg gagaggacct
721 gagggcccgt gttagctaca ggctgctggg ggtcatctca ctgctgcacc tggtgctgtc
781 catggggctg cagctgtacg gtttcaggca gcggcagcga gccaggaagg agtggaggct
841 gcaccgcggc ctgtctcacc gcagggcctc cttggaggag agagccgttt ccagaaaccc
901 cctgtgcacc ctgtgcctgg aggagcgcag gcacccaaca gccacgccct gcggccacct
961 gttctgctgg gagtgcatca ccgcgtggtg cagcagcaag gcggagtgtc ccctctgccg
1021 ggagaagttc cctccccaga agctcatcta ccttcggcac taccgctgag ccggcgcccg
1081 ggtgggcctg gacacagatg acctctacgg gagtctgaac gccaagattt agtctcagga
1141 ttaaccttgc ttgcacagaa gttagaacac tctcagtttt ttgtcatgta agatactaac
1201 ctagccaccc tgggagagaa cagaaagctg tccctggctg cactttctca gccctgggag
1261 gggcgcctga acccagaaca tttccctaac cccaacctgg taggactcag ccacttcttc
1321 aggaatttca cttatttgga cgggatttta ggtttccctc ccttccccaa accatacagt
1381 tgagaagtaa ttcagaagta ggccagaaga cactttattc gtttatattg tgagaaaaca
1441 gccccatcag gcttgtgtta aggcaatgga ctgaatgagt gcgtgctggg tggggtgggg
1501 cacggaggct ggcgggttgc ttcagccagt gcagtgagaa cagcagcccc acggccccat
1561 gggaggcggc gctgctctcc ccgagggcgg ctgggcagag cacatccccc aggacttgat
1621 gaccacacgg ggcagagaga aaccaaccaa ggccagcacc tccgtcggaa gcatttggca
1681 cacacacctt caatacacgt caaggtcgct tccagtttta gaaaacagaa atctgcatct
1741 cagcctgaga cgcacagaga ggtctcttcc tgacccagac gcactcacga gccaggtcct
1801 gggggtatgg gggctgccag gggcgcccga gccctctcct ggggggcctg ctgggcaggc
1861 gacctgctga cccacggtca ctgctgtgtt cagcccctca gctcggcccc agcctatttc
1921 ccgcctccat ttgatgtttc caggttttca aaactgcatt taacctgcgc cagagagttc
1981 accgtaggca tctttaataa actaactcca gcaaaatgtg ggtacgttac taaaaaaaaa
2041 aaaaaaaaaa aaa
//