LOCUS BC000521 2727 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens fascin homolog 1, actin-bundling protein
(Strongylocentrotus purpuratus), mRNA (cDNA clone MGC:8587
IMAGE:2961047), complete cds.
ACCESSION BC000521
VERSION BC000521.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2727)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2727)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000521.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49472815.
FEATURES Location/Qualifiers
source 1..2727
/db_xref="H-InvDB:HIT000029703"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8587 IMAGE:2961047"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2727
/gene="FSCN1"
/gene_synonym="fascin"
/gene_synonym="p55"
/db_xref="GeneID:6624"
/db_xref="HGNC:HGNC:11148"
/db_xref="MIM:602689"
CDS 24..1505
/gene="FSCN1"
/gene_synonym="fascin"
/gene_synonym="p55"
/codon_start=1
/product="fascin homolog 1, actin-bundling protein
(Strongylocentrotus purpuratus)"
/protein_id="AAH00521.1"
/db_xref="GeneID:6624"
/db_xref="HGNC:HGNC:11148"
/db_xref="MIM:602689"
/translation="MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQ
IWTLEQPPDEAGSAAVCLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWS
LQSEAHRRYFGGTEDRLSCFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPA
DEIAVDRDVPWGVDSLITLAFQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRS
GKVAFRDCEGRYLAPSGPSGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTR
QGMDLSANQDEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTASSKNASC
YFDIEWRDRRITLRASNGKFVTSKKNGQLAASVETAGDSELFLMKLINRPIIVFRGEH
GFIGCRKVTGTLDANRSSYDVFQLEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVD
FFFEFCDYNKVAIKVGGRYLKGDHAGVLKASAETVDPASLWEY"
BASE COUNT 508 a 912 c 818 g 489 t
ORIGIN
1 gttcggcctc atcaactgcc accatgaccg ccaacggcac agccgaggcg gtgcagatcc
61 agttcggcct catcaactgc ggcaacaagt acctgacggc cgaggcgttc gggttcaagg
121 tgaacgcgtc cgccagcagc ctgaagaaga agcagatctg gacgctggag cagccccctg
181 acgaggcggg cagcgcggcc gtgtgcctgc gcagccacct gggccgctac ctggcggcgg
241 acaaggacgg caacgtgacc tgcgagcgcg aggtgcccgg tcccgactgc cgtttcctca
301 tcgtggcgca cgacgacggt cgctggtcgc tgcagtccga ggcgcaccgg cgctacttcg
361 gcggcaccga ggaccgcctg tcctgcttcg cgcagacggt gtcccccgcc gagaagtgga
421 gcgtgcacat cgccatgcac cctcaggtca acatctacag cgtcacccgt aagcgctacg
481 cgcacctgag cgcgcggccg gccgacgaga tcgccgtgga ccgcgacgtg ccctggggcg
541 tcgactcgct catcaccctc gccttccagg accagcgcta cagcgtgcag accgccgacc
601 accgcttcct gcgccacgac gggcgcctgg tggcgcgccc cgagccggcc actggctaca
661 cgctggagtt ccgctccggc aaggtggcct tccgcgactg cgagggccgt tacctggcgc
721 cgtcggggcc cagcggcacg ctcaaggcgg gcaaggccac caaggtgggc aaggacgagc
781 tctttgctct ggagcagagc tgcgcccagg tcgtgctgca ggcggccaac gagaggaacg
841 tgtccacgcg ccagggtatg gacctgtctg ccaatcagga cgaggagacc gaccaggaga
901 ccttccagct ggagatcgac cgcgacacca aaaagtgtgc cttccgtacc cacacgggca
961 agtactggac gctgacggcc accgggggcg tgcagtccac cgcctccagc aagaatgcca
1021 gctgctactt tgacatcgag tggcgtgacc ggcgcatcac actgagggcg tccaatggca
1081 agtttgtgac ctccaagaag aatgggcagc tggccgcctc ggtggagaca gcaggggact
1141 cagagctctt cctcatgaag ctcatcaacc gccccatcat cgtgttccgc ggggagcatg
1201 gcttcatcgg ctgccgcaag gtcacgggca ccctggacgc caaccgctcc agctatgacg
1261 tcttccagct ggagttcaac gatggcgcct acaacatcaa agactccaca ggcaaatact
1321 ggacggtggg cagtgactcc gcggtcacca gcagcggcga cactcctgtg gacttcttct
1381 tcgagttctg cgactataac aaggtggcca tcaaggtggg cgggcgctac ctgaagggcg
1441 accacgcagg cgtcctgaag gcctcggcgg aaaccgtgga ccccgcctcg ctctgggagt
1501 actagggccg gcccgtcctt ccccgcccct gcccacatgg cggctcctgc caaccctccc
1561 tgctaacccc ttctccgcca ggtgggctcc agggcgggag gcaagccccc ttgcctttca
1621 aactggaaac cccagagaaa acggtgcccc cacctgtcgc ccctatggac tccccactct
1681 cccctccgcc cgggttccct actcccctcg ggtcagcggc tgcggcctgg ccctgggagg
1741 gatttcagat gcccctgccc tcttgtctgc cacggggcga gtctggcacc tctttcttct
1801 gacctcagac ggctctgagc cttatttctc tggaagcggc taagggacgg ttgggggctg
1861 ggagccctgg gcgtgtagtg taactggaat cttttgcctc tcccagccac ctcctcccag
1921 ccccccagga gagctgggca catgtcccaa gcctgtcagt ggccctccct ggtgcactgt
1981 ccccgaaacc cctgcttggg aagggaagct gtcgggtggg ctaggactga cccttgtggt
2041 gtttttttgg gtggtggctg gaaacagccc ctctcccacg tggcagaggc tcagcctggc
2101 tcccttccct ggagcggcag ggcgtgacgg ccacagggtc tgcccgctgc acgttctgcc
2161 aaggtggtgg tggcgggcgg gtaggggtgt gggggccgtc ttcctcctgt ctctttcctt
2221 tcaccctagc ctgactggaa gcagaaaatg accaaatcag tatttttttt aatgaaatat
2281 tattgctgga ggcgtcccag gcaagcctgg ctgtagtagc gagtgatctg gcggggggcg
2341 tctcagcacc ctccccaggg ggtgcatctc agccccctct ttccgtcctt cccgtccagc
2401 cccagccctg ggcctgggct gccgacacct gggccagagc ccctgctgtg attggtgctc
2461 cctgggcctc ccgggtggat gaagccaggc gtcgccccct ccgggagccc tggggtgagc
2521 cgccggggcc cccctgctgc cagcctcccc cgtccccaac atgcatctca ctctgggtgt
2581 cttggtcttt tattttttgt aagtgtcatt tgtataactc taaacgccca tgatagtagc
2641 ttcaaactgg aaatagcgaa ataaaataac tcagtctgca gccccaaaaa aaaaaaaaaa
2701 aaaaaaaaaa aaaaaaaaaa aaaaaaa
//