LOCUS BC000518 1612 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens brain abundant, membrane attached signal protein 1,
mRNA (cDNA clone MGC:8555 IMAGE:2822874), complete cds.
ACCESSION BC000518
VERSION BC000518.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1612)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1612)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000518.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: j Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30795230.
FEATURES Location/Qualifiers
source 1..1612
/db_xref="H-InvDB:HIT000029700"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8555 IMAGE:2822874"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1612
/gene="BASP1"
/gene_synonym="CAP-23"
/gene_synonym="CAP23"
/gene_synonym="MGC8555"
/gene_synonym="NAP-22"
/gene_synonym="NAP22"
/db_xref="GeneID:10409"
/db_xref="HGNC:HGNC:957"
/db_xref="MIM:605940"
CDS 179..862
/gene="BASP1"
/gene_synonym="CAP-23"
/gene_synonym="CAP23"
/gene_synonym="MGC8555"
/gene_synonym="NAP-22"
/gene_synonym="NAP22"
/codon_start=1
/product="brain abundant, membrane attached signal protein
1"
/protein_id="AAH00518.1"
/db_xref="GeneID:10409"
/db_xref="HGNC:HGNC:957"
/db_xref="MIM:605940"
/translation="MGGKLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKESEPQA
AAEPAEAKEGKEKPDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPK
APEQEQAAPGPAAGGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTGAPAAPAAQ
ETKSDGAPASDSKPGSSEAAPSSKETPAATEAPSSTPKAQGPAASAEEPKPVEAPAAN
SDQTVTVKE"
BASE COUNT 399 a 466 c 452 g 295 t
ORIGIN
1 cggcgacgac ggcggcggca gcgctccaac tggctcctcg ctccgggctc cgccgtcgag
61 ccgggagaga gcctccgcca gcggccaggc accagccaga cgacgccagc gaccccggcc
121 tctcggcggc accgcgctaa ctcaggggct gcataggcac ccagagccga actccaagat
181 gggaggcaag ctcagcaaga agaagaaggg ctacaatgtg aacgacgaga aagccaagga
241 gaaagacaag aaggccgagg gcgcggcgac ggaagaggag gggaccccga aggagagtga
301 gccccaggcg gccgcagagc ccgccgaggc caaggagggc aaggagaagc ccgaccagga
361 cgccgagggc aaggccgagg agaaggaggg cgagaaggac gcggcggctg ccaaggagga
421 ggccccgaag gcggagcccg agaagacgga gggcgcggca gaggccaagg ctgagccccc
481 gaaggcgccc gagcaggagc aggcggcccc cggccccgct gcgggcggcg aggcccccaa
541 agctgctgag gccgccgcgg ccccggccga gagcgcggcc cctgccgccg gggaggagcc
601 cagcaaggag gaaggggaac ccaaaaagac tggggcgccc gcagctcctg ccgcccagga
661 gaccaaaagt gacggggccc cagcttcaga ctcaaaaccc ggcagctcgg aggctgcccc
721 ctcttccaag gagacccccg cagccacgga agcgcctagt tccacaccca aggcccaggg
781 ccccgcagcc tctgcagaag agcccaagcc ggtggaggcc ccggcagcta attccgacca
841 aaccgtaacc gtgaaagagt gacaaggaca gcctatagga aaaacaatac cacttaaaac
901 aatctcctct ctctctctct ctctctctat ctctctctct atctcctctc tctctctcct
961 ctcctatctc tcctctctct ctctcctata ctaacttgtt tcaaattgga agtaatgata
1021 tgtattgccc aaggaaaaat acaggatgtt gtcccatcaa gggagggagg gggtgggaga
1081 atccaaatag tatttttgtg gggaaatatc taatatacct tcagtcaact ttaccaagaa
1141 gtcctggatt tccaagatcc gcgtctgaaa gtgcagtaca tcgtttgtac ctgaaactgc
1201 cgccacatgc actcctccac cgctgagagt tgaatagctt ttcttctgca atgggagttg
1261 ggagtgatgc gtttgattct gcccacaggg cctgtgccaa ggcaatcaga tctttatgag
1321 agcagtattt tctgtgtttt ctttttaatt tacagccttt cttattttga tattttttta
1381 atgttgtgga tgaatgccag ctttcagaca gagcccactt agcttgtcca catggatctc
1441 aatgccaatc ctccattctt cctctccaga tatttttggg agtgacaaac attctctcat
1501 cctacttagc ctacctagat ttctcatgac gagttaatgc atgtccgtgg ttgggtgcac
1561 ctgtagttct gtttattggt cagtggaaat gaaaaaaaaa aaaaaaaaaa aa
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