LOCUS BC000513 3020 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens cholinergic receptor, nicotinic, alpha 3, mRNA (cDNA clone MGC:8545 IMAGE:2822768), complete cds. ACCESSION BC000513 VERSION BC000513.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3020) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3020) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC000513.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: j Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 19923121. FEATURES Location/Qualifiers source 1..3020 /db_xref="H-InvDB:HIT000029695" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8545 IMAGE:2822768" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3020 /gene="CHRNA3" /db_xref="GeneID:1136" /db_xref="HGNC:HGNC:1957" /db_xref="MIM:118503" CDS 187..1704 /gene="CHRNA3" /codon_start=1 /product="cholinergic receptor, nicotinic, alpha 3" /protein_id="AAH00513.1" /db_xref="GeneID:1136" /db_xref="HGNC:HGNC:1957" /db_xref="MIM:118503" /translation="MGSGPLSLPLALSPPRLLLLLLLSLLPVARASEAEHRLFERLFE DYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSD YGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCK IDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGSSMNLKDYWESGEWAIIKAPGYKHD IKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLC ISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPT THTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCK EGYPCQDGMCGYCHHRRIKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKY IAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGTAGLFLQPLMAREDA" BASE COUNT 760 a 770 c 692 g 798 t ORIGIN 1 gtcctcccgc gggtccgagg gcgctggaaa cccagcggcg gcgaagcgga gaggagcccc 61 gcgcgtctcc gcccgcacgg ctccaggtct ggggtctgcg ctggagccgc gcggggagag 121 gccgtctctg cgaccgccgc gcccgctccc gaccgtccgg gtccgcggcc agcccggcca 181 ccagccatgg gctctggccc gctctcgctg cccctggcgc tgtcgccgcc gcggctgctg 241 ctgctgctgc tgctgtctct gctgccagtg gccagggcct cagaggctga gcaccgtcta 301 tttgagcggc tgtttgaaga ttacaatgag atcatccggc ctgtagccaa cgtgtctgac 361 ccagtcatca tccatttcga ggtgtccatg tctcagctgg tgaaggtgga tgaagtaaac 421 cagatcatgg agaccaacct gtggctcaag caaatctgga atgactacaa gctgaagtgg 481 aacccctctg actatggtgg ggcagagttc atgcgtgtcc ctgcacagaa gatctggaag 541 ccagacattg tgctgtataa caatgctgtt ggggatttcc aggtggacga caagaccaaa 601 gccttactca agtacactgg ggaggtgact tggatacctc cggccatctt taagagctcc 661 tgtaaaatcg acgtgaccta cttcccgttt gattaccaaa actgtaccat gaagttcggt 721 tcctggtcct acgataaggc gaaaatcgat ctggtcctga tcggctcttc catgaacctc 781 aaggactatt gggagagcgg cgagtgggcc atcatcaaag ccccaggcta caaacacgac 841 atcaagtaca actgctgcga ggagatctac cccgacatca catactcgct gtacatccgg 901 cgcctgccct tgttctacac catcaacctc atcatcccct gcctgctcat ctccttcctc 961 actgtgctcg tcttctacct gccctccgac tgcggtgaga aggtgaccct gtgcatttct 1021 gtcctcctct ccctgacggt gtttctcctg gtgatcactg agaccatccc ttccacctcg 1081 ctggtcatcc ccctgattgg agagtacctc ctgttcacca tgatttttgt aaccttgtcc 1141 atcgtcatca ccgtcttcgt gctcaacgtg cactacagaa ccccgacgac acacacaatg 1201 ccctcatggg tgaagactgt attcttgaac ctgctcccca gggtcatgtt catgaccagg 1261 ccaacaagca acgagggcaa cgctcagaag ccgaggcccc tctacggtgc cgagctctca 1321 aatctgaatt gcttcagccg cgcagagtcc aaaggctgca aggagggcta cccctgccag 1381 gacgggatgt gtggttactg ccaccaccgc aggataaaaa tctccaattt cagtgctaac 1441 ctcacgagaa gctctagttc tgaatctgtt gatgctgtgc tgtccctctc tgctttgtca 1501 ccagaaatca aagaagccat ccaaagtgtc aagtatattg ctgaaaatat gaaagcacaa 1561 aatgaagcca aagagattca agatgattgg aagtatgttg ccatggtgat tgatcgtatt 1621 tttctgtggg ttttcaccct ggtgtgcatt ctagggacag caggattgtt tctgcaaccc 1681 ctgatggcca gggaagatgc ataagcacta agctgtgtgc ctgcctggga gacttccttg 1741 tgtcagggca ggaggaggct gcttcctagt aagaacgtac tttctgttat caagctacca 1801 gctttgtttt tggcatttcg aggtttactt attttccact tatcttggaa tcatgcaaaa 1861 aaaaaaatgt caagagtatt tattaccgat aaatgaacat ttaactagcc tttttggtat 1921 ggtaaagaga tgtcaaaatg tgattctatg tgattagtat gctatgctat ggaatataca 1981 tgtaaaaatg tttcctttta gttgttgaaa caaaactgga tagaaaaatg ctgttcagaa 2041 atatgaaaag tcattcagtt atcactacag atctcccagt aatttttctt atttagccca 2101 taatctcttt gaaggtttat actaattcag caatccccca tcgttaccca tttcttacca 2161 tgcatttctc gttctttact gggtctaaag ggctatgcct ccatttcaga gagcttcaac 2221 tacttctctt gcatacttct aaattatact atgagaaatc atgcctagtt attcattgtt 2281 aatataactg tcttagtaca ccataaactg ggtggattat aaacaacaga aacttctcag 2341 ttttggaggt tgggaggtcc aaggtcaagg caccagcaaa tttggtgtct ggtgagggtc 2401 ctcttcctca aagggtgcct tctagctgtg tcctcacatg actgaaggga ctagctatct 2461 ctgtggggtc tattttataa gggcactaac cccattcatg agagcagagc ccccatggcc 2521 taatcacctt tccaaggccc caccttctat ctaagacaat cacgctggga ataggtttca 2581 acatatgaat tgggggagga cacatttgga ccacagcatg aacctttaga acagggtttc 2641 tcagccttag cactacggac attttgggct ggataaatat gtgttggtac agaatggggg 2701 tatcctgtgc attgtaggat ctttagcagt accctagcct caactcacta gatgccaatg 2761 acataccttg cttcttcacc agttatgata accaagaatg tctccattgt taaatgtccc 2821 cttaggagca aaattgcccc tggttgagaa acattgcttt agacaaattg ttaagagtat 2881 catgtactac acttctgaaa cttaacgtga tcatcaccac tgacagatga ttcacagaga 2941 gagactgttt gaatcttgtc tcactagttt ttcctgtgca aaaataaaat ggacagaatt 3001 gcaaaaaaaa aaaaaaaaaa //