LOCUS BC000512 1604 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) 26S subunit, ATPase,
1, mRNA (cDNA clone MGC:8541 IMAGE:2822718), complete cds.
ACCESSION BC000512
VERSION BC000512.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1604)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000512.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: j Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24430150.
FEATURES Location/Qualifiers
source 1..1604
/db_xref="H-InvDB:HIT000029694"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8541 IMAGE:2822718"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1604
/gene="PSMC1"
/gene_synonym="MGC24583"
/gene_synonym="MGC8541"
/gene_synonym="P26S4"
/gene_synonym="p56"
/gene_synonym="S4"
/db_xref="GeneID:5700"
/db_xref="HGNC:HGNC:9547"
/db_xref="MIM:602706"
CDS 35..1357
/gene="PSMC1"
/gene_synonym="MGC24583"
/gene_synonym="MGC8541"
/gene_synonym="P26S4"
/gene_synonym="p56"
/gene_synonym="S4"
/codon_start=1
/product="proteasome (prosome, macropain) 26S subunit,
ATPase, 1"
/protein_id="AAH00512.1"
/db_xref="GeneID:5700"
/db_xref="HGNC:HGNC:9547"
/db_xref="MIM:602706"
/translation="MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPD
AASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDL
RGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVI
GVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKP
PKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEE
HAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI
ETLDPALIRPGRIDRKIEFPLPDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSG
ADIKAICTEAGLMALRERRMKVTNEDFKKSKENVLYKKQEGTPEGLYL"
BASE COUNT 514 a 319 c 410 g 361 t
ORIGIN
1 ttccggcagc ggcagctcaa gtggccaagg caagatgggt caaagtcaga gtggtggtca
61 tggtcctgga ggtggcaaga aggatgacaa ggacaagaaa aagaaatatg aacctcctgt
121 accaactaga gtggggaaaa agaagaagaa aacaaaggga ccagatgctg ccagcaaact
181 gccactggtg acacctcaca ctcagtgccg gttaaaatta ctgaagttag agagaattaa
241 agactatctt ctcatggagg aagaattcat tagaaatcag gaacaaatga aaccattaga
301 agaaaagcaa gaggaggaaa gatcaaaagt ggatgatctg agggggaccc cgatgtcagt
361 aggaaccttg gaagagatta ttgatgacaa tcatgccatc gtgtctacat ctgtgggctc
421 agaacactac gtcagcattc tttcatttgt agacaaggat ctgctggaac ctggctgctc
481 ggtcctgctc aaccacaagg tgcatgccgt gataggggtg ctgatggatg acacggatcc
541 cctggtcaca gtgatgaagg tagaaaaggc cccccaggag acctatgcag atattggggg
601 gttggacaac caaattcagg aaattaagga atctgtggag cttcctctca cccatcctga
661 atattatgaa gagatgggta taaagcctcc taagggggtc attctctatg gtccacctgg
721 cacaggtaaa accttgttag ccaaagcagt agcaaaccaa acctcagcca ctttcttgag
781 agtggttggc tctgaactta ttcagaagta cctaggtgat gggcccaaac tcgtacggga
841 attgttccga gttgctgaag aacatgcacc gtccatcgtg tttattgatg aaattgacgc
901 cattgggaca aaaagatatg actccaattc tggtggtgag agagaaattc agcgaacaat
961 gttggaactg ctgaaccagt tggatggatt tgattctagg ggagatgtga aagttatcat
1021 ggccacaaac cgaatagaaa ctttggatcc agcacttatc agaccaggcc gcattgacag
1081 gaagattgag ttccccctgc ctgatgaaaa gacgaagaag cgcatctttc agattcacac
1141 aagcaggatg acgctggctg atgatgtaac cctggacgac ctgatcatgg ctaaagatga
1201 cctctctggt gctgacatca aggcaatctg tacagaagct ggtctgatgg ccttaagaga
1261 acgtagaatg aaagtaacaa atgaagactt caaaaaatct aaagaaaatg ttctttataa
1321 gaaacaggaa ggcacccctg aggggctgta tctctaatga accatggctg tcatcaggaa
1381 aatggttggg agatttctca atccctgaaa gggatgaggt tgggggagtt gcccagagga
1441 atccctgttc ccactgattt ttattagcaa aacatcctgt gtcttttgga gtacgatgtg
1501 taagtgccca ttgggtggcc tgttggtcac tgtgcagcag tctgcttccc aataaagcgt
1561 gctctttcac aaacaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//