LOCUS BC000509 999 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, beta type, 7,
mRNA (cDNA clone MGC:8507 IMAGE:2822305), complete cds.
ACCESSION BC000509
VERSION BC000509.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 999)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 999)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000509.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110926.
FEATURES Location/Qualifiers
source 1..999
/db_xref="H-InvDB:HIT000029691"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8507 IMAGE:2822305"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..999
/gene="PSMB7"
/gene_synonym="Z"
/db_xref="GeneID:5695"
/db_xref="HGNC:HGNC:9544"
/db_xref="MIM:604030"
CDS 5..838
/gene="PSMB7"
/gene_synonym="Z"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, beta
type, 7"
/protein_id="AAH00509.1"
/db_xref="GeneID:5695"
/db_xref="HGNC:HGNC:9544"
/db_xref="MIM:604030"
/translation="MAAVSVYAPPVGGFSFDNCRRNAVLEADFAKRGYKLPKARKTGT
TIAGVVYKDGIVLGADTRATEGMVVADKNCSKIHFISPNIYCCGAGTAADTDMTTQLI
SSNLELHSLSTGRLPRVVTANRMLKQMLFRYQGYIGAALVLGGVDVTGPHLYSIYPHG
STDKLPYVTMGSGSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDL
CVISKNKLDFLRPYTVPNKKGTRLGRYRCEKGTTAVLTEKITPLEIEVLEETVQTMDT
S"
BASE COUNT 287 a 225 c 260 g 227 t
ORIGIN
1 gaagatggcg gctgtgtcgg tgtatgctcc accagttgga ggcttctctt ttgataactg
61 ccgcaggaat gccgtcttgg aagccgattt tgcaaagagg ggatacaagc ttccaaaggc
121 ccggaaaact ggcacgacca tcgctggggt ggtctataag gatggcatag ttcttggagc
181 agatacaaga gcaactgaag ggatggttgt tgctgacaag aactgttcaa aaatacactt
241 catatctcct aatatttatt gttgtggtgc tgggacagct gcagacacag acatgacaac
301 ccagctcatt tcttccaacc tggagctcca ctccctctcc actggccgtc ttcccagagt
361 tgtgacagcc aatcggatgc tgaagcagat gcttttcagg tatcaaggtt acattggtgc
421 agccctagtt ttagggggag tagatgttac tggacctcac ctctacagca tctatcctca
481 tggatcaact gataagttgc cttatgtcac catgggttct ggctccttgg cagcaatggc
541 tgtatttgaa gataagttta ggccagacat ggaggaggag gaagccaaga atctggtgag
601 cgaagccatc gcagctggca tcttcaacga cctgggctcc ggaagcaaca ttgacctctg
661 cgtcatcagc aagaacaagc tggattttct ccgcccatac acagtgccca acaagaaggg
721 gaccaggctt ggccggtaca ggtgtgagaa agggactact gcagtcctca ctgagaaaat
781 cactcctctg gagattgagg tgctggaaga aacagtccaa acaatggaca cttcctgaat
841 ggcatcagtg ggtggctggc cgcggttctg gaaggtggtg agcattgagg cccagtaaga
901 cactcatgtg gctagtgttt gccgaatgaa actcaactca ataaaaaaca aaaaccaaat
961 tgggcagctg aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//