LOCUS BC000486 492 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens small nuclear ribonucleoprotein D2 polypeptide
16.5kDa, mRNA (cDNA clone MGC:8353 IMAGE:2819767), complete cds.
ACCESSION BC000486
VERSION BC000486.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 492)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 492)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000486.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: b Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29294622.
FEATURES Location/Qualifiers
source 1..492
/db_xref="H-InvDB:HIT000029670"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8353 IMAGE:2819767"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..492
/gene="SNRPD2"
/gene_synonym="SMD2"
/db_xref="GeneID:6633"
/db_xref="HGNC:HGNC:11159"
/db_xref="MIM:601061"
CDS 27..383
/gene="SNRPD2"
/gene_synonym="SMD2"
/codon_start=1
/product="small nuclear ribonucleoprotein D2 polypeptide
16.5kDa"
/protein_id="AAH00486.1"
/db_xref="GeneID:6633"
/db_xref="HGNC:HGNC:11159"
/db_xref="MIM:601061"
/translation="MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLI
NCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLR
GDSVIVVLRNPLIAGK"
BASE COUNT 148 a 123 c 129 g 92 t
ORIGIN
1 agtgaacgga gagcgtagtg accatcatga gcctcctcaa caagcccaag agtgagatga
61 ccccagagga gctgcagaag cgagaggagg aggaatttaa caccggtcca ctctctgtgc
121 tcacacagtc agtcaagaac aatacccaag tgctcatcaa ctgccgcaac aataagaaac
181 tcctgggccg cgtgaaggcc ttcgataggc actgcaacat ggtgctggag aacgtgaagg
241 agatgtggac tgaggtaccc aagagtggca agggcaagaa gaagtccaag ccagtcaaca
301 aagaccgcta catctccaag atgttcctgc gcggggactc agtcatcgtg gtcctgcgga
361 acccgctcat cgccggcaag taggggccgc ctgtctgttg acagaactca ctcctctgtc
421 ctatgaagac cgctgccatt ggtgttgaga ataataaagc tctgtgtttt tttctaaaaa
481 aaaaaaaaaa aa
//