LOCUS BC000472 889 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein S4, X-linked, mRNA (cDNA clone
MGC:8636 IMAGE:2961540), complete cds.
ACCESSION BC000472
VERSION BC000472.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 889)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 889)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000472.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: n Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 39812410.
FEATURES Location/Qualifiers
source 1..889
/db_xref="H-InvDB:HIT000029657"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8636 IMAGE:2961540"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..889
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/db_xref="GeneID:6191"
/db_xref="HGNC:HGNC:10424"
/db_xref="MIM:312760"
CDS 9..800
/gene="RPS4X"
/gene_synonym="CCG2"
/gene_synonym="DXS306"
/gene_synonym="SCAR"
/gene_synonym="SCR10"
/codon_start=1
/product="ribosomal protein S4, X-linked"
/protein_id="AAH00472.1"
/db_xref="GeneID:6191"
/db_xref="HGNC:HGNC:10424"
/db_xref="MIM:312760"
/translation="MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPL
IIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISIDKTGENFRLI
YDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDPLIKVNDTI
QIDLETGKITDFIKFDTGNLCMVTGGANLGRIGVITNRERHPGSFDVVHVKDANGNSF
ATRLSNIFVIGKGNKPWISLPRGKGIRLTIAEERDKRLAAKQSSG"
BASE COUNT 261 a 197 c 219 g 212 t
ORIGIN
1 acgcagccat ggctcgtggt cccaagaagc atctgaagcg ggtggcagct ccaaagcatt
61 ggatgctgga taaattgacc ggtgtgtttg ctcctcgtcc atccaccggt ccccacaagt
121 tgagagagtg tctccccctc atcattttcc tgaggaacag acttaagtat gccctgacag
181 gagatgaagt aaagaagatt tgcatgcagc ggttcattaa aatcgatggc aaggtccgaa
241 ctgatataac ctaccctgct ggattcatgg atgtcatcag cattgacaag acgggagaga
301 atttccgtct gatctatgac accaagggtc gctttgctgt acatcgtatt acacctgagg
361 aggccaagta caagttgtgc aaagtgagaa agatctttgt gggcacaaaa ggaatccctc
421 atctggtgac tcatgatgcc cgcaccatcc gctaccccga tcccctcatc aaggtgaatg
481 ataccattca gattgatttg gagactggca agattactga tttcatcaag ttcgacactg
541 gtaacctgtg tatggtgact ggaggtgcta acctaggaag aattggtgtg atcaccaaca
601 gagagaggca ccctggatct tttgacgtgg ttcacgtgaa agatgccaat ggcaacagct
661 ttgccactcg actttccaac atttttgtta ttggcaaggg caacaaacca tggatttctc
721 ttccccgagg aaagggtatc cgcctcacca ttgctgaaga gagagacaaa agactggcgg
781 ccaaacagag cagtgggtga aatgggtccc tgggtgacat gtcagatctt tgtacgtaat
841 taaaaatatt gtggcaggat taatagcaaa aaaaaaaaaa aaaaaaaaa
//