LOCUS BC000460 1457 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 3, mRNA (cDNA clone MGC:8506
IMAGE:2822303), complete cds.
ACCESSION BC000460
VERSION BC000460.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1457)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1457)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000460.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: h Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8393566.
FEATURES Location/Qualifiers
source 1..1457
/db_xref="H-InvDB:HIT000029645"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8506 IMAGE:2822303"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1457
/gene="SPOCK3"
/gene_synonym="HSAJ1454"
/gene_synonym="TES-3"
/db_xref="GeneID:50859"
/db_xref="HGNC:HGNC:13565"
/db_xref="MIM:607989"
CDS 93..1394
/gene="SPOCK3"
/gene_synonym="HSAJ1454"
/gene_synonym="TES-3"
/codon_start=1
/product="sparc/osteonectin, cwcv and kazal-like domains
proteoglycan (testican) 3"
/protein_id="AAH00460.1"
/db_xref="GeneID:50859"
/db_xref="HGNC:HGNC:13565"
/db_xref="MIM:607989"
/translation="MLKVSAVLCVCAAAWCSQSLAAAAAVAAAGGRSDGGNFLDDKQW
LTTISQYDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQD
SQTAVCISHRRLTHRMKEAGVDHRQWRGPILSTCKQCPVVYPSPVCGSDGHTYSFQCK
LEYQACVLGKQISVKCEGHCPCPSDKPTSTSRNVKRACSDLEFREVANRLRDWFKALH
ESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDTNYDLLLDQSELRSIYLD
KNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKRQGVKKLLGQY
IPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEISGDFASGDF
HEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDDGGDDHDVYI"
BASE COUNT 444 a 285 c 379 g 349 t
ORIGIN
1 ggcgcgtgca gcagctccag aaagcagcga gttggcagag cagggctgca tttccagcag
61 gagctgcgag cacagtgctg gctcacaaca agatgctcaa ggtgtcagcc gtactgtgtg
121 tgtgtgcagc cgcttggtgc agtcagtctc tcgcagctgc cgcggcggtg gctgcagccg
181 gggggcggtc ggacggcggt aattttctgg atgataaaca atggctcacc acaatctctc
241 agtatgacaa ggaagtcgga cagtggaaca aattccgaga cgatgattat ttccgcactt
301 ggagtccagg aaaacccttc gatcaggctt tagatccagc taaggatcca tgcttaaaga
361 tgaaatgtag tcgccataaa gtatgcattg ctcaagattc tcagactgca gtctgcatta
421 gtcaccggag gcttacacac aggatgaaag aagcaggagt agaccatagg cagtggaggg
481 gtcccatatt atccacctgc aagcagtgcc cagtggtcta tcccagccct gtttgtggtt
541 cagatggtca tacctactct tttcagtgca aactagaata tcaggcatgt gtcttaggaa
601 aacagatctc agtcaaatgt gaaggacatt gcccatgtcc ttcagataag cccaccagta
661 caagcagaaa tgttaagaga gcatgcagtg acctggagtt cagggaagtg gcaaacagat
721 tgcgggactg gttcaaggcc cttcatgaaa gtggaagtca aaacaagaag acaaaaacat
781 tgctgaggcc tgagagaagc agattcgata ccagcatctt gccaatttgc aaggactcac
841 ttggctggat gtttaacaga cttgatacaa actatgacct gctattggac cagtcagagc
901 tcagaagcat ttaccttgat aagaatgaac agtgtaccaa ggcattcttc aattcttgtg
961 acacatacaa ggacagttta atatctaata atgagtggtg ctactgcttc cagagacagc
1021 aagacccacc ttgccagact gagctcagca atattcagaa gcggcaaggg gtaaagaagc
1081 tcctaggaca gtatatcccc ctgtgtgatg aagatggtta ctacaagcca acacaatgtc
1141 atggcagtgt tggacagtgc tggtgtgttg acagatatgg aaatgaagtc atgggatcca
1201 gaataaatgg tgttgcagat tgtgctatag attttgagat ctccggagat tttgctagtg
1261 gcgattttca tgaatggact gatgatgagg atgatgaaga cgatattatg aatgatgaag
1321 atgaaattga agatgatgat gaagatgaag gggatgatga tgatggtggt gatgaccatg
1381 atgtatacat ttgattgatg acagttgaaa tcaataaatt ctacatttct aatatttaca
1441 aaaaaaaaaa aaaaaaa
//