LOCUS BC000433 1834 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mitogen-activated protein kinase 13, mRNA (cDNA clone
MGC:8364 IMAGE:2819932), complete cds.
ACCESSION BC000433
VERSION BC000433.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1834)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1834)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000433.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: b Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20986527.
FEATURES Location/Qualifiers
source 1..1834
/db_xref="H-InvDB:HIT000029619"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8364 IMAGE:2819932"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1834
/gene="MAPK13"
/gene_synonym="p38delta"
/gene_synonym="SAPK4"
/db_xref="GeneID:5603"
/db_xref="HGNC:HGNC:6875"
/db_xref="MIM:602899"
CDS 42..1139
/gene="MAPK13"
/gene_synonym="p38delta"
/gene_synonym="SAPK4"
/codon_start=1
/product="mitogen-activated protein kinase 13"
/protein_id="AAH00433.1"
/db_xref="GeneID:5603"
/db_xref="HGNC:HGNC:6875"
/db_xref="MIM:602899"
/translation="MSLIRKKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAID
KRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD
FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE
DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLT
GKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPR
ASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFRDPEEETEAQQPFDDSLEHEKLT
VDEWKQHIYKEIVNFSPIARKDSRRRSGMKL"
BASE COUNT 431 a 497 c 515 g 391 t
ORIGIN
1 cgcagccgcc acgccggggc cgccgagatc gggtgcccgg gatgagcctc atccggaaaa
61 agggcttcta caagcaggac gtcaacaaga ccgcctggga gctgcccaag acctacgtgt
121 ccccgacgca cgtcggcagc ggggcctatg gctccgtgtg ctcggccatc gacaagcggt
181 caggggagaa ggtggccatc aagaagctga gccgaccctt tcagtccgag atcttcgcca
241 agcgcgccta ccgggagctg ctgctgctga agcacatgca gcatgagaac gtcattgggc
301 tcctggatgt cttcacccca gcctcctccc tgcgcaactt ctatgacttc tacctggtga
361 tgcccttcat gcagacggat ctgcagaaga tcatggggat ggagttcagt gaggagaaga
421 tccagtacct ggtgtatcag atgctcaaag gccttaagta catccactct gctggggtcg
481 tgcacaggga cctgaagcca ggcaacctgg ctgtgaatga ggactgtgaa ctgaagattc
541 tggattttgg gctggcgcga catgcagacg ccgagatgac tggctacgtg gtgacccgct
601 ggtaccgagc ccccgaggtg atcctcagct ggatgcacta caaccagaca gtggacatct
661 ggtctgtggg ctgtatcatg gcagagatgc tgacagggaa aactctgttc aaggggaaag
721 attacctgga ccagctgacc cagatcctga aagtgaccgg ggtgcctggc acggagtttg
781 tgcagaagct gaacgacaaa gcggccaaat cctacatcca gtccctgcca cagaccccca
841 ggaaggattt cactcagctg ttcccacggg ccagccccca ggctgcggac ctgctggaga
901 agatgctgga gctagacgtg gacaagcgcc tgacggccgc gcaggccctc acccatccct
961 tctttgaacc cttccgggac cctgaggaag agacggaggc ccagcagccg tttgatgatt
1021 ccttagaaca cgagaaactc acagtggatg aatggaagca gcacatctac aaggagattg
1081 tgaacttcag ccccattgcc cggaaggact cacggcgccg gagtggcatg aagctgtagg
1141 gactcatctt gcatggcacc accggccaga cactgcccaa ggaccagtat ttgtcactac
1201 caaactcagc ccttcttgga atacagcctt tcaagcagag gacagaaggg tccttctcct
1261 tatgtgggaa atgggcctag tagatgcaga attcaaagat gtcggttggg agaaactagc
1321 tctgatccta acaggccacg ttaaactgcc catctggaga atcgcctgca ggtggggccc
1381 tttccttccc gccagagtgg ggctgagtgg gcgctgagcc aggccggggg cctatggcag
1441 tgatgctgtg ttggtttcct agggatgctc taacgaatta ccacaaacct ggtggattga
1501 aacagcagaa cttgattccc ttacagttct ggaggctgga aatctgggat ggaggtgttg
1561 gcagggctgt ggtccctttg aaggctctgg ggaagaatcc ttccttggct ctttttagct
1621 tgtggcggca gtgggcagtc cgtggcattc cccagcttat tgctgcatca ctccagtctc
1681 tgtctcttct gttctctcct cttttaacaa cagtcattgg atttagggcc caccctaatc
1741 ctgtgtgatc ttatcttgat ccttattaat taaacctgca aatactctag ttccaaataa
1801 agtcacattc tcaggtaaaa aaaaaaaaaa aaaa
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