LOCUS BC000417 982 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens single-strand-selective monofunctional uracil-DNA
glycosylase 1, mRNA (cDNA clone MGC:8633 IMAGE:2961516), complete
cds.
ACCESSION BC000417
VERSION BC000417.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 982)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 982)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000417.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: m Column: 24.
FEATURES Location/Qualifiers
source 1..982
/db_xref="H-InvDB:HIT000029603"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8633 IMAGE:2961516"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..982
/gene="SMUG1"
/gene_synonym="FDG"
/gene_synonym="HMUDG"
/gene_synonym="UNG3"
/db_xref="GeneID:23583"
/db_xref="HGNC:HGNC:17148"
/db_xref="IMGT/GENE-DB:17148"
/db_xref="MIM:607753"
CDS 371..904
/gene="SMUG1"
/gene_synonym="FDG"
/gene_synonym="HMUDG"
/gene_synonym="UNG3"
/codon_start=1
/product="SMUG1 protein"
/protein_id="AAH00417.1"
/db_xref="GeneID:23583"
/db_xref="HGNC:HGNC:17148"
/db_xref="IMGT/GENE-DB:17148"
/db_xref="MIM:607753"
/translation="MPQAFLLGSIHEPAGALMEPQPCPGSLAESFLEEELRLNAELSQ
LQFSEPVGIIYNPVEYAWEPHRNYVTRYCQGPKEVLFLGMNPGPFGMAQTGVPFGEVS
MVRDWLGIVGPVLTPPQEHPKRPVLGLECPQSEGPRQSMGHEIKSELLMGGCSWIRGK
IQCDRVQVRRPGFSSQL"
BASE COUNT 232 a 258 c 277 g 215 t
ORIGIN
1 cggctcccag ggtcgtcggg gctgagccga gagggtggtt agaatttcta tattttgggg
61 tccctccctc cgtatggggt aagactcagt gcagggagag cccagcctat gaaaccgcct
121 gggaggtctg caggatcaag gctttccagt cggccggagc cagcgggcgc ccccggaggc
181 tggagtgcaa tggcgcgatc tcagctcact gcagcctccg cctcccgggt tcaagcgatt
241 cttctgcctc agcctcccga gtagcagatt atgagcttac agaaagcctg gcctacattt
301 tactcttttt ggatttcttc ctcatcaaga gactgctgcg gtgcctgtca tgtgacagcg
361 gcatggacat atgccccagg ctttcctgct ggggtccatc catgagcctg caggtgccct
421 catggagccc cagccctgcc ctggaagctt ggctgagagc ttcctggagg aggagcttcg
481 gctcaatgct gagctgagcc agctgcagtt ttcggagcct gtgggcatca tctacaatcc
541 cgtggagtat gcatgggagc cacatcgcaa ctacgtgact cgctactgcc agggccccaa
601 ggaagtactc ttcctgggca tgaaccctgg accttttggc atggcccaga ctggggtgcc
661 ctttggggaa gtaagcatgg tccgggactg gttgggcatt gtggggcctg tgctgacccc
721 tccccaagag catcctaaac gaccagtgct gggactggag tgcccacagt cagaaggacc
781 aagacaaagc atgggacatg aaattaagag tgaacttctt atgggaggct gcagctggat
841 cagaggaaaa atccagtgtg acagagtgca agtcagaaga cctggctttt catcccagct
901 ttgaaacttg gaactttttg attgacaaat taataaacct ctctatgcct caaaaaaaaa
961 aaaaaaaaaa aaaaaaaaaa aa
//