LOCUS BC000389 1352 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tetraspanin 4, mRNA (cDNA clone MGC:8437
IMAGE:2821236), complete cds.
ACCESSION BC000389
VERSION BC000389.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000389.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: e Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 68799924.
FEATURES Location/Qualifiers
source 1..1352
/db_xref="H-InvDB:HIT000029578"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8437 IMAGE:2821236"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1352
/gene="TSPAN4"
/gene_synonym="NAG-2"
/gene_synonym="NAG2"
/gene_synonym="TETRASPAN"
/gene_synonym="TSPAN-4"
/db_xref="GeneID:7106"
/db_xref="HGNC:HGNC:11859"
/db_xref="MIM:602644"
CDS 136..852
/gene="TSPAN4"
/gene_synonym="NAG-2"
/gene_synonym="NAG2"
/gene_synonym="TETRASPAN"
/gene_synonym="TSPAN-4"
/codon_start=1
/product="tetraspanin 4"
/protein_id="AAH00389.1"
/db_xref="GeneID:7106"
/db_xref="HGNC:HGNC:11859"
/db_xref="MIM:602644"
/translation="MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL
SSSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAI
LFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVY
NATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQIL
GLTFAMTMYCQVVKADTYCA"
BASE COUNT 232 a 436 c 415 g 269 t
ORIGIN
1 cgggaggcgg cggcgcagag cttggggctt ccttggtcgc acccaccacc tgcctgccca
61 ctggtcagcc ttcagggacc ctgagcaccg cctggtctct ttcctgtggc cagcccagaa
121 ctgaagcgct gcggcatggc gcgcgcctgc ctccaggccg tcaagtacct catgttcgcc
181 ttcaacctgc tcttctggct gggaggctgt ggcgtgctgg gtgtcggcat ctggctggcc
241 gccacacagg ggagcttcgc cacgctgtcc tcttccttcc cgtccctgtc ggctgccaac
301 ctgctcatca tcaccggcgc ctttgtcatg gccatcggct tcgtgggctg cctgggtgcc
361 atcaaggaga acaagtgcct cctgctcact ttcttcctgc tgctgctgct ggtgttcctg
421 ctggaggcca ccatcgccat cctcttcttc gcctacacgg acaagattga caggtatgcc
481 cagcaagacc tgaagaaagg cttgcacctg tacggcacgc agggcaacgt gggcctcacc
541 aacgcctgga gcatcatcca gaccgacttc cgctgctgtg gcgtctccaa ctacactgac
601 tggttcgagg tgtacaacgc cacgcgggta cctgactcct gctgcttgga gttcagtgag
661 agctgtgggc tgcacgcccc cggcacctgg tggaaggcgc cgtgctacga gacggtgaag
721 gtgtggcttc aggagaacct gctggctgtg ggcatctttg ggctgtgcac ggcgctggtg
781 cagatcctgg gcctgacctt cgccatgacc atgtactgcc aagtggtcaa ggcagacacc
841 tactgcgcgt aggccgccca ccgcccgctt ctctgccaaa aggacgccca cggggagatg
901 gccgcaccca cagctgcctt tcccaccacc agcctcggtg ctctgcccca tgctgggagg
961 agggagggag ggacaggtgc ctggagcccc cggaaccctg tttctggaag gccctagctc
1021 aggtggcttc agggcctccg gaccccccct gggaggggtg gccacgtgct ggctgcggaa
1081 cccagggcag gggtgggagg ggcctccagc actttttata tttacgtatt ctccaaagca
1141 gtgttcacac gggagccagc ctgtggcccc cagcctcctg gaaaacaggt tggcgctgga
1201 ggagccgggt cttggcatcc tggaggtggc cccactggtc ctggtgctcc aggcggggcc
1261 gtggacccct cacctacatt ccatagtggg cccgtggggc tcctggtgca tcttaataaa
1321 gtgtgagcag caaaaaaaaa aaaaaaaaaa aa
//