LOCUS BC000359 1086 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens SEC11 homolog A (S. cerevisiae), mRNA (cDNA clone
MGC:8670 IMAGE:2964504), complete cds.
ACCESSION BC000359
VERSION BC000359.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1086)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1086)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000359.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: o Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 33859831.
FEATURES Location/Qualifiers
source 1..1086
/db_xref="H-InvDB:HIT000029551"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8670 IMAGE:2964504"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1086
/gene="SEC11A"
/gene_synonym="1810012E07Rik"
/gene_synonym="sid2895"
/gene_synonym="SPC18"
/gene_synonym="SPCS4A"
/db_xref="GeneID:23478"
/db_xref="HGNC:HGNC:17718"
CDS 56..595
/gene="SEC11A"
/gene_synonym="1810012E07Rik"
/gene_synonym="sid2895"
/gene_synonym="SPC18"
/gene_synonym="SPCS4A"
/codon_start=1
/product="SEC11 homolog A (S. cerevisiae)"
/protein_id="AAH00359.3"
/db_xref="GeneID:23478"
/db_xref="HGNC:HGNC:17718"
/translation="MLSLDFLDDVRRMNKRQLYYQVLNFGMIVSSALMIWKGLMVITG
SESPIVVVLSGSMEPAFHRGDLLFLTNRVEDPIRVGEIVVFRIEGREIPIVHRVLKIH
EKQNGHIKFLTKGDNNAVDDRGLYKQGQHWLEKKDVVGRARGFVPYIGIVTILMNDYP
KFKYAVLFLLGLFVLVHRE"
BASE COUNT 296 a 197 c 265 g 328 t
ORIGIN
1 gcccgctggt catcgcgccc tttcccctgc cggtgtcctg ctcgccgtcc ccgccatgct
61 gtctctagac tttttggacg atgtgcggcg gatgaacaag cggcagctct attatcaagt
121 cctaaatttt ggaatgattg tctcatcggc actaatgatc tggaaggggt taatggtaat
181 aactggaagt gaaagtccga ttgtagtggt gctcagtggc agcatggaac ctgcatttca
241 tagaggagat cttctctttc taacaaatcg agttgaagat cccatacgag tgggagaaat
301 tgttgttttt aggatagaag gaagagagat tcctatagtt caccgagtct tgaagattca
361 tgaaaagcaa aatgggcata tcaagttttt gaccaaagga gataataatg cggttgatga
421 ccgaggcctc tataaacaag gacaacattg gctagagaaa aaagatgttg tggggagagc
481 caggggattt gttccttata ttggaattgt gacgatcctc atgaatgact atcctaaatt
541 taagtatgca gttctctttt tgctgggttt attcgtgctg gttcatcgtg agtaagaagc
601 ctgccttgct gttcctggga agatgccata gttttcgtta ctggatgttt ggagtagata
661 ctggtctgtg attggtggaa tggagaacac acgtgttggt gcttctgggt agcactggtt
721 tgcattagtt tatgtttcca tgccagagtt tgtgtgggcg ggcgcatgtg caccacagag
781 tgcactcgag gggactttca gtcacaggat ttcataattg tcattgtcac actttcaaat
841 ttttgtacat cagtgaattt ttttatatta aaaggttgag ccaaagcccc cagtgtttgt
901 attttgaagc caagcttcac ttctaaagtg cctacagaga cttgtaaatg aaaatgcagc
961 tctgcacgag tttgaaaccg tcatacctcc ttctattagg aatggcatat actgaggtgg
1021 tcgtaagtct taacttctaa aattttaaat aaaagacttt gcacattgaa aaaaaaaaaa
1081 aaaaaa
//