LOCUS BC000352 1006 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 1
(PA28 alpha), mRNA (cDNA clone MGC:8628 IMAGE:2961448), complete
cds.
ACCESSION BC000352
VERSION BC000352.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1006)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1006)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000352.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30581140.
FEATURES Location/Qualifiers
source 1..1006
/db_xref="H-InvDB:HIT000029544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8628 IMAGE:2961448"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1006
/gene="PSME1"
/gene_synonym="IFI5111"
/gene_synonym="MGC8628"
/gene_synonym="PA28A"
/gene_synonym="PA28alpha"
/gene_synonym="REGalpha"
/db_xref="GeneID:5720"
/db_xref="HGNC:HGNC:9568"
/db_xref="MIM:600654"
CDS 92..841
/gene="PSME1"
/gene_synonym="IFI5111"
/gene_synonym="MGC8628"
/gene_synonym="PA28A"
/gene_synonym="PA28alpha"
/gene_synonym="REGalpha"
/codon_start=1
/product="proteasome (prosome, macropain) activator
subunit 1 (PA28 alpha)"
/protein_id="AAH00352.1"
/db_xref="GeneID:5720"
/db_xref="HGNC:HGNC:9568"
/db_xref="MIM:600654"
/translation="MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFL
KEPALNEANLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCG
PVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELM
TSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVME
IRNAYAVLYDIILKNFEKLKKPRGETKGMIY"
BASE COUNT 272 a 250 c 266 g 218 t
ORIGIN
1 cggagctggg tgcgagcgcc ctaccgcttt cgctttccct tcgcggtgcc cactccactc
61 cttgtgcggc gctaggcccc ccgtcccggt catggccatg ctcagggtcc agcccgaggc
121 ccaagccaag gtggatgtgt ttcgtgaaga cctctgtacc aagacagaga acctgctcgg
181 gagctatttc cccaagaaga tttctgagct ggatgcattt ttaaaggagc cagctctcaa
241 tgaagccaac ttgagcaatc tgaaggcccc attggacatc ccagtgcctg atccagtcaa
301 ggagaaagag aaagaggagc ggaagaaaca gcaggagaag gaagacaagg atgaaaagaa
361 gaagggggag gatgaagaca aaggtcctcc ctgtggccca gtgaactgca atgaaaagat
421 cgtggtcctt ctgcagcgct tgaagcctga gatcaaggat gtcattgagc agctcaacct
481 ggtcaccacc tggttgcagc tgcagatacc tcggattgag gatggtaaca attttggagt
541 ggctgtccag gagaaggtgt ttgagctgat gaccagcctc cacaccaagc tagaaggctt
601 ccacactcaa atctctaagt atttctctga gcgtggtgat gcagtgacta aagcagccaa
661 gcagccccat gtgggtgatt atcggcagct ggtgcacgag ctggatgagg cagagtaccg
721 ggacatccgg ctgatggtca tggagatccg caatgcttat gctgtgttat atgacatcat
781 cctgaagaac ttcgagaagc tcaagaagcc caggggagaa acaaagggaa tgatctattg
841 agagccctct ctcccattct gtgatgagta cagcagagac cttcctgctt tttactgggg
901 actccagatt ttccccaaac ttgcttctgt tgagattttt ccctcacctt gcctctcagg
961 cacaataaat atagttatac cactgcccaa aaaaaaaaaa aaaaaa
//