LOCUS BC000352 1006 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 1 (PA28 alpha), mRNA (cDNA clone MGC:8628 IMAGE:2961448), complete cds. ACCESSION BC000352 VERSION BC000352.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1006) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1006) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC000352.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: m Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30581140. FEATURES Location/Qualifiers source 1..1006 /db_xref="H-InvDB:HIT000029544" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:8628 IMAGE:2961448" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1006 /gene="PSME1" /gene_synonym="IFI5111" /gene_synonym="MGC8628" /gene_synonym="PA28A" /gene_synonym="PA28alpha" /gene_synonym="REGalpha" /db_xref="GeneID:5720" /db_xref="HGNC:HGNC:9568" /db_xref="MIM:600654" CDS 92..841 /gene="PSME1" /gene_synonym="IFI5111" /gene_synonym="MGC8628" /gene_synonym="PA28A" /gene_synonym="PA28alpha" /gene_synonym="REGalpha" /codon_start=1 /product="proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)" /protein_id="AAH00352.1" /db_xref="GeneID:5720" /db_xref="HGNC:HGNC:9568" /db_xref="MIM:600654" /translation="MAMLRVQPEAQAKVDVFREDLCTKTENLLGSYFPKKISELDAFL KEPALNEANLSNLKAPLDIPVPDPVKEKEKEERKKQQEKEDKDEKKKGEDEDKGPPCG PVNCNEKIVVLLQRLKPEIKDVIEQLNLVTTWLQLQIPRIEDGNNFGVAVQEKVFELM TSLHTKLEGFHTQISKYFSERGDAVTKAAKQPHVGDYRQLVHELDEAEYRDIRLMVME IRNAYAVLYDIILKNFEKLKKPRGETKGMIY" BASE COUNT 272 a 250 c 266 g 218 t ORIGIN 1 cggagctggg tgcgagcgcc ctaccgcttt cgctttccct tcgcggtgcc cactccactc 61 cttgtgcggc gctaggcccc ccgtcccggt catggccatg ctcagggtcc agcccgaggc 121 ccaagccaag gtggatgtgt ttcgtgaaga cctctgtacc aagacagaga acctgctcgg 181 gagctatttc cccaagaaga tttctgagct ggatgcattt ttaaaggagc cagctctcaa 241 tgaagccaac ttgagcaatc tgaaggcccc attggacatc ccagtgcctg atccagtcaa 301 ggagaaagag aaagaggagc ggaagaaaca gcaggagaag gaagacaagg atgaaaagaa 361 gaagggggag gatgaagaca aaggtcctcc ctgtggccca gtgaactgca atgaaaagat 421 cgtggtcctt ctgcagcgct tgaagcctga gatcaaggat gtcattgagc agctcaacct 481 ggtcaccacc tggttgcagc tgcagatacc tcggattgag gatggtaaca attttggagt 541 ggctgtccag gagaaggtgt ttgagctgat gaccagcctc cacaccaagc tagaaggctt 601 ccacactcaa atctctaagt atttctctga gcgtggtgat gcagtgacta aagcagccaa 661 gcagccccat gtgggtgatt atcggcagct ggtgcacgag ctggatgagg cagagtaccg 721 ggacatccgg ctgatggtca tggagatccg caatgcttat gctgtgttat atgacatcat 781 cctgaagaac ttcgagaagc tcaagaagcc caggggagaa acaaagggaa tgatctattg 841 agagccctct ctcccattct gtgatgagta cagcagagac cttcctgctt tttactgggg 901 actccagatt ttccccaaac ttgcttctgt tgagattttt ccctcacctt gcctctcagg 961 cacaataaat atagttatac cactgcccaa aaaaaaaaaa aaaaaa //