LOCUS BC000346 1576 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens dual specificity phosphatase 11 (RNA/RNP complex
1-interacting), mRNA (cDNA clone MGC:8576 IMAGE:2960939), complete
cds.
ACCESSION BC000346
VERSION BC000346.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1576)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1576)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC000346.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: k Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4503414.
FEATURES Location/Qualifiers
source 1..1576
/db_xref="H-InvDB:HIT000029539"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8576 IMAGE:2960939"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1576
/gene="DUSP11"
/gene_synonym="PIR1"
/db_xref="GeneID:8446"
/db_xref="HGNC:HGNC:3066"
/db_xref="MIM:603092"
CDS 102..1094
/gene="DUSP11"
/gene_synonym="PIR1"
/codon_start=1
/product="dual specificity phosphatase 11 (RNA/RNP complex
1-interacting)"
/protein_id="AAH00346.1"
/db_xref="GeneID:8446"
/db_xref="HGNC:HGNC:3066"
/db_xref="MIM:603092"
/translation="MSQWHHPRSGWGRRRDFSGRSSAKKKGGNHIPERWKDYLPVGQR
MPGTRFIAFKVPLQKSFEKKLAPEECFSPLDLFNKIREQNEELGLIIDLTYTQRYYKP
EDLPETVPYLKIFTVGHQVPDDETIFKFKHAVNGFLKENKDNDKLIGVHCTHGLNRTG
YLICIYLIDVEGVRPDDAIELFNRCRGHCLERQNYIEDLQNGPIRKNWNSSVPRSSDF
EDSAHLMQPVHNKPVKQGPRYNLHQIQGHSAPRHFHTQTQSLQQSVRKFSENPHVYQR
HHLPPPGPPGEDYSHRRYSWNVKPNASRAAQDRRRWYPYNYSRLSYPACWEWTQ"
BASE COUNT 469 a 319 c 316 g 472 t
ORIGIN
1 gccgagtctt ttcctgttta gggtcttatc ctggcattga gggcgccgga ctggcgcttt
61 tggccggctt ggcattgggt gggcggcttc ttgggaccca catgagccag tggcatcatc
121 cccgcagtgg ctggggccgg agacgcgact tttcaggacg ctcctcagcc aagaagaagg
181 gcggaaacca catccccgaa aggtggaaag actatctccc agttggacag cggatgcctg
241 ggactcgttt cattgctttc aaagttcctt tgcaaaagag ttttgaaaag aaacttgctc
301 cagaagaatg cttttcccct ttggatcttt ttaacaaaat ccgagaacaa aatgaagaac
361 ttggactgat tattgattta acatatactc aacgctatta taaaccagag gatttgccag
421 aaactgttcc ttacttaaaa atttttacag ttggacatca agtgcctgat gatgagacta
481 tttttaaatt caaacacgct gttaatgggt ttttgaaaga aaataaagat aatgataaac
541 ttattggtgt ccactgtacc catggtttaa acaggactgg ctacctcatt tgcatatatt
601 tgattgatgt agaaggcgtg aggccagatg atgcaattga attattcaat aggtgccggg
661 gacattgctt agaaagacaa aactacattg aagaccttca gaatggtcct atcagaaaga
721 attggaattc cagtgtaccc aggtcaagtg attttgaaga ctcagcacat ctcatgcaac
781 cagtccacaa taagcctgtt aaacaaggac ctaggtataa tctacatcag atccagggtc
841 actcagctcc tcgacatttc cacacccaga cccaaagttt gcaacaatca gtcagaaaat
901 tttcagagaa tccacatgtt taccagagac accatctccc tcctcctggt ccccctggag
961 aggactattc acacaggagg tattcttgga atgtgaagcc caatgccagt cgggcagccc
1021 aggatagaag aaggtggtat ccttataatt actccagact ctcctatcca gcctgttggg
1081 aatggaccca gtgatacaaa cctgtcctgg aattctacct ggagaccaga gctggcctga
1141 aaattactgg tgtgactttt aattagttca ggtctaatca ggtttcttta ttgttccctt
1201 atgtattcaa gcttaaggaa aaattgcatt gctgtttacc tctttgctga taaatttgca
1261 gtaattacag cattgcagga aaaacaatct gttattccag tcttaaattt ttctaaaaga
1321 agacaatatt ttagaactga agcattgaga acttcccttg caaattattt ttaaaattct
1381 atcttgtttt tctatgtatt tctttctgac tagacttgtg atatgcgtgt gtttatgtac
1441 agaaattttt agtgtttttg ttatgttctg ttattgaccc aaaggccatc tttattttct
1501 ataactgttc aaaatttata ttaaaatcta cttaggagat aatttcttta gaacctaaaa
1561 aaaaaaaaaa aaaaaa
//