LOCUS BC000339 1900 bp mRNA linear HUM 18-MAY-2004
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 2, mRNA (cDNA
clone MGC:8562 IMAGE:2822956), complete cds.
ACCESSION BC000339
VERSION BC000339.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1900)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1900)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000339.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: k Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4506898.
FEATURES Location/Qualifiers
source 1..1900
/db_xref="H-InvDB:HIT000029532"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:8562 IMAGE:2822956"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1900
/gene="SFRS2"
/gene_synonym="PR264"
/gene_synonym="SC-35"
/gene_synonym="SC35"
/gene_synonym="SRp30b"
/db_xref="GeneID:6427"
/db_xref="MIM:600813"
CDS 152..817
/gene="SFRS2"
/gene_synonym="PR264"
/gene_synonym="SC-35"
/gene_synonym="SC35"
/gene_synonym="SRp30b"
/codon_start=1
/product="SFRS2 protein"
/protein_id="AAH00339.1"
/db_xref="GeneID:6427"
/db_xref="MIM:600813"
/translation="MSYGRPPPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVY
IPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSR
RGPPPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRST
SKSRSARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEEEGA
VSS"
BASE COUNT 470 a 466 c 461 g 503 t
ORIGIN
1 agcctgcgga gcccgtccgt gctgttctgc ggcaaggcct ttcccagtgt ccccacgcgg
61 aaggcaactg cctgagaggc gcggcgtcgc accgcccaga gctgaggaag ccggcgccag
121 ttcgcggggc tccgggccgc cactcagagc tatgagctac ggccgccccc ctcccgatgt
181 ggagggtatg acctccctca aggtggacaa cctgacctac cgcacctcgc ccgacacgct
241 gaggcgcgtc ttcgagaagt acgggcgcgt cggcgacgtg tacatcccgc gggatcgcta
301 caccaaggag tcccgcggct tcgccttcgt tcgctttcac gacaagcgcg acgctgagga
361 cgctatggat gccatggacg gggccgtgct ggacggccgc gagctgcggg tgcaaatggc
421 gcgctacggc cgccccccgg actcacacca cagccgccgg ggaccgccac cccgcaggta
481 cgggggcggt ggctacggac gccggagccg cagccctagg cggcgtcgcc gcagccgatc
541 ccggagtcgg agccgttcca ggtctcgcag ccgatctcgc tacagccgct cgaagtctcg
601 gtcccgcact cgttctcgat ctcggtcgac ctccaagtcc agatccgcac gaaggtccaa
661 gtccaagtcc tcgtcggtct ccagatctcg ttcgcggtcc aggtcccggt ctcggtccag
721 gagtcctccc ccagtgtcca agagggaatc caaatccagg tcgcgatcga agagtccccc
781 caagtctcct gaagaggaag gagcggtgtc ctcttaagaa aatgatgtat cggcaagcag
841 tgtaaacgga ggacttgggg aaaaaggacc acatagtcca tcgaagaaga gtccttggaa
901 caagcaactg gctattgaaa aggttatttt gtaacatttg tctaactttt tacttgttta
961 agctttgcct cagttggcaa acttcatttt atgtgccatt ttgttgctgt tattcaaatt
1021 tcttgtaatt tagtgaggtg aacgacttca gatttcatta ttggatttgg atatttgagg
1081 taaaatttca ttttgttata tagtgctgac tttttttgtt tgaaattaaa cagattggta
1141 acctaatttg tggcctcctg acttttaagg aaaacgtgtg cagccattac acacagccta
1201 aagctgtcaa gagattgact cggcattgcc ttcattcctt aaaattaaaa acctacaaaa
1261 gttggtgtaa atttgtatat gttatttacc ttcagatcta aatggtaatc tgaacccaaa
1321 tttgtataaa gacttttcag gtgaaaagac ttgatttttt gaaaggattg tttatcaaac
1381 acaattctaa tctcttctct tatgtatttt tgtgcactag gcgcagttgt gtagcagttg
1441 agtaatgctg gttagctgtt aaggtggcgt gttgcagtgc agagtgcttg gctgtttcct
1501 gttttctccc gattgctcct gtgtaaagat gccttgtcgt gcagaaacaa atggctgtcc
1561 agtttattaa aatgcctgac aactgcactt ccagtcaccc gggccttgca tataaataac
1621 ggagcataca gtgagcacat ctagctgatg ataaatacac ctttttttcc ctcttccccc
1681 taaaaatggt aaatctgatc atatctacat gtatgaactt aacatggaaa atgttaagga
1741 agcaaatggt tgtaactttg taagtactta taacatggtg tatctttttg cttatgaata
1801 ttctgtatta taaccattgt ttctgtagtt taattaaaac attttcttgg tgttagcttt
1861 tctcagaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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