LOCUS BC000297 2068 bp mRNA linear HUM 11-AUG-2006 DEFINITION Homo sapiens 3-hydroxy-3-methylglutaryl-Coenzyme A synthase 1 (soluble), mRNA (cDNA clone IMAGE:2819708), partial cds. ACCESSION BC000297 VERSION BC000297.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2068) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2068) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 20, 2003 this sequence version replaced BC000297.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 1 Row: a Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 54020719. FEATURES Location/Qualifiers source 1..2068 /db_xref="H-InvDB:HIT000029496" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:2819708" /tissue_type="Lung, small cell carcinoma" /clone_lib="NIH_MGC_7" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..2068 /gene="HMGCS1" /db_xref="GeneID:3157" /db_xref="HGNC:HGNC:5007" /db_xref="MIM:142940" CDS <1..1668 /gene="HMGCS1" /codon_start=1 /product="HMGCS1 protein" /protein_id="AAH00297.2" /db_xref="GeneID:3157" /db_xref="HGNC:HGNC:5007" /db_xref="MIM:142940" /translation="HSLSSAAARSRLCPKEETVTDLETAVLYPSHSSFTMPGSLPLNA EACWPKDVGIVALEIYFPSQYVDQAELEKYDGVDAGKYTIGLGQAKMGFCTDREDINS LCMTVVQNLMERNNLSYDCIGRLEVGTETIIDKSKSVKTNLMQLFEESGNTDIEGIDT TNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDIAVYATGNARPTGGVGAVALLIGP NAPLIFERGLRGTHMQHAYDFYKPDMLSEYPIVDGKLSIQCYLSALDRCYSVYCKKIH AQWQKEGNDKDFTLNDFGFMIFHSPYCKLVQKSLARMLLNDFLNDQNRDKNSIYSGLE AFGDVKLEDTYFDRDVEKAFMKASSELFSQKTKASLLVSNQNGNMYTSSVYGSLASVL AQYSPQQLAGKRIGVFSYGSGLAATLYSLKVTQDATPGSALDKITASLCDLKSRLDSR TGVAPDVFAENMKLREDTHHLVNYIPQGSIDSLFEGTWYLVRVDEKHRRTYARRPTPN DDTLDEGVGLVHSNIATEHIPSPAKKVPRLPATAAEPEAAVISNGEH" BASE COUNT 605 a 392 c 484 g 587 t ORIGIN 1 cactcccttt cctctgctgc cgctcggtca cgcttgtgcc cgaaggagga aacagtgaca 61 gacctggaga ctgcagttct ctatccttca cacagctctt tcaccatgcc tggatcactt 121 cctttgaatg cagaagcttg ctggccaaaa gatgtgggaa ttgttgccct tgagatctat 181 tttccttctc aatatgttga tcaagcagag ttggaaaaat atgatggtgt agatgctgga 241 aagtatacca ttggcttggg ccaggccaag atgggcttct gcacagatag agaagatatt 301 aactctcttt gcatgactgt ggttcagaat cttatggaga gaaataacct ttcctatgat 361 tgcattgggc ggctggaagt tggaacagag acaatcatcg acaaatcaaa gtctgtgaag 421 actaatttga tgcagctgtt tgaagagtct gggaatacag atatagaagg aatcgacaca 481 actaatgcat gctatggagg cacagctgct gtcttcaatg ctgttaactg gattgagtcc 541 agctcttggg atggacggta tgccctggta gttgcaggag atattgctgt atatgccaca 601 ggaaatgcta gacctacagg tggagttgga gcagtagctc tgctaattgg gccaaatgct 661 cctttaattt ttgaacgagg gcttcgtggg acacatatgc aacatgccta tgatttttac 721 aagcctgata tgctatctga atatcctata gtagatggaa aactctccat acagtgctac 781 ctcagtgcat tagaccgctg ctactctgtc tactgcaaaa agatccatgc ccagtggcag 841 aaagagggaa atgataaaga ttttaccttg aatgattttg gcttcatgat ctttcactca 901 ccatattgta aactggttca gaaatctcta gctcggatgt tgctgaatga cttccttaat 961 gaccagaata gagataaaaa tagtatctat agtggcctgg aagcctttgg ggatgttaaa 1021 ttagaagaca cctactttga tagagatgtg gagaaggcat ttatgaaggc tagctctgaa 1081 ctcttcagtc agaaaacaaa ggcatcttta cttgtatcaa atcaaaatgg aaatatgtac 1141 acatcttcag tatatggttc ccttgcatct gttctagcac agtactcacc tcagcaatta 1201 gcagggaaga gaattggagt gttttcttat ggttctggtt tggctgccac tctgtactct 1261 cttaaagtca cacaagatgc tacaccgggg tctgctcttg ataaaataac agcaagttta 1321 tgtgatctta aatcaaggct tgattcaaga actggtgtgg caccagatgt cttcgctgaa 1381 aacatgaagc tcagagagga cacccatcat ttggtcaact atattcccca gggttcaata 1441 gattcactct ttgaaggaac gtggtactta gttagggtgg atgaaaagca cagaagaact 1501 tacgctcggc gtcccactcc aaatgatgac actttggatg aaggagtagg acttgtgcat 1561 tcaaacatag caactgagca tattccaagc cctgccaaga aagtaccaag actccctgcc 1621 acagcagcag aacctgaagc agctgtcatt agtaatgggg aacattaaga tactctgtga 1681 ggtgcaagac ttcagggtgg ggtgggcatg gggtgggggt atgggaacag ttggaggaat 1741 gggatatctg gggataattt taaaggatta catgttatgt aaatttttat gtgactgaca 1801 tggagcctgg atgactatcg tgtacttggg aaagtctctt tgctctattt gctgacatgc 1861 ttcctgttgt ggtctggcca atgccaaatg tactcgaatg atgttaaggg ctctgtaaaa 1921 cttcatacct ctttggccat ttgtatgcat gatgtttggt ttttaaacat ggtataatga 1981 attgtgtact tctgtcagaa gaaagcagag gtactaatct ccaattaaaa aattttttaa 2041 catgtaaaaa aaaaaaaaaa aaaaaaaa //