LOCUS BC000294 968 bp mRNA linear SYN 02-SEP-2016
DEFINITION Synthetic construct Homo sapiens translocase of inner mitochondrial
membrane 17 homolog A (yeast), mRNA (cDNA clone MGC:8336
IMAGE:2819455), complete cds.
ACCESSION BC000294
VERSION BC000294.2
KEYWORDS MGC.
SOURCE synthetic construct
ORGANISM synthetic construct
other sequences; artificial sequences.
REFERENCE 1 (bases 1 to 968)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 968)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC000294.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 1 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5454119.
FEATURES Location/Qualifiers
source 1..968
/db_xref="H-InvDB:HIT000085825"
/organism="synthetic construct"
/mol_type="mRNA"
/isolation_source="Homo sapiens; Lung, small cell
carcinoma"
/db_xref="taxon:32630"
/clone="MGC:8336 IMAGE:2819455"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..968
/gene="TIMM17A"
/gene_synonym="TIM17"
/gene_synonym="TIM17A"
/db_xref="GeneID:10440"
/db_xref="MIM:605057"
CDS 7..522
/gene="TIMM17A"
/gene_synonym="TIM17"
/gene_synonym="TIM17A"
/codon_start=1
/transl_table=11
/product="TIMM17A protein"
/protein_id="AAH00294.2"
/db_xref="GeneID:10440"
/db_xref="MIM:605057"
/translation="MEEYAREPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGV
NHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAI
LAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASAQFPNGPQFAEDPSQLPSTQLP
SSPFGDYRQYQ"
misc_feature 10..345
/gene="TIMM17A"
/gene_synonym="TIM17"
/gene_synonym="TIM17A"
/note="Region: Tim17/Tim22/Tim23 family. The pre-protein
translocase of the mitochondrial outer membrane (Tom)
allows the import of pre-proteins from the cytoplasm. Tom
forms a complex with a number of proteins, including
Tim17. Tim17 and Tim23 are thought to form the
translocation channel of the inner membrane. This family
includes Tim17, Tim22 and Tim23"
/db_xref="CDD:pfam02466"
BASE COUNT 296 a 177 c 229 g 266 t
ORIGIN
1 gtcaagatgg aggagtacgc gcgagagcct tgcccatggc gaattgtgga tgactgtggt
61 ggggccttta cgatgggtac cattggtggt ggtatctttc aagcaatcaa aggttttcgc
121 aattctccag tgggagtaaa ccacagacta cgagggagtt tgacagctat taaaaccagg
181 gctccacagt taggaggtag ctttgcagtt tggggagggc tgttttccat gattgactgt
241 agtatggttc aagtcagagg aaaggaagat ccctggaact ccatcacaag tggtgcctta
301 acgggagcca tactggcagc aagaaatgga ccagtggcca tggttgggtc agccgcaatg
361 ggtggcattc tcctagcttt aattgaagga gctggtatct tgttgacaag atttgcctct
421 gcacagtttc ccaatggtcc tcagtttgca gaagacccct cccagttgcc ttcaactcag
481 ttaccttcct caccttttgg agactatcga caatatcagt aggacttctt tcctaggatt
541 tctttaacag aacgagttgt ggttcgagaa ggatttcaga agatcaagtt acagtctgtt
601 tttaaaacca taggtgggac agctatggcc aataggctat aaagagacat ttagcacttt
661 tttctattta aaggaacaag cggggaaggg tgctaaaaga taatacgttt atttattcac
721 acttgaattg catttgtgat caaaataaat gtttaaatcg ctaaaggaaa atacagtaag
781 tgcttgaaag atgaaggacc aaaaggccaa aaaacagtga aatatgatca tcatctcctt
841 gcggacttct ctgcctggtt ttgtgtgttc tgttattcaa acaataaaaa gctggtggaa
901 cttactcttt cttttaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aactcgaggc
961 atctatgt
//