LOCUS BC000284 2466 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens golgi associated, gamma adaptin ear containing, ARF
binding protein 2, mRNA (cDNA clone MGC:1002 IMAGE:3356490),
complete cds.
ACCESSION BC000284
VERSION BC000284.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2466)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2466)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: e Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336262.
FEATURES Location/Qualifiers
source 1..2466
/db_xref="H-InvDB:HIT000029487"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1002 IMAGE:3356490"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2466
/gene="GGA2"
/gene_synonym="FLJ20966"
/gene_synonym="KIAA1080"
/gene_synonym="VEAR"
/db_xref="GeneID:23062"
/db_xref="HGNC:HGNC:16064"
/db_xref="MIM:606005"
CDS 66..1907
/gene="GGA2"
/gene_synonym="FLJ20966"
/gene_synonym="KIAA1080"
/gene_synonym="VEAR"
/codon_start=1
/product="golgi associated, gamma adaptin ear containing,
ARF binding protein 2"
/protein_id="AAH00284.1"
/db_xref="GeneID:23062"
/db_xref="HGNC:HGNC:16064"
/db_xref="MIM:606005"
/translation="MAATAVAAAVAGTESAQGPPGPAASLELWLNKATDPSMSEQDWS
AIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQEKEALYALTVLEMCMNHCGEKFHSEVA
KFRFLNELIKVLSPKYLGSWATGKVKGRVIEILFSWTVWFPEDIKIRDAYQMLKKQGI
IKQDPKLPVDKILPPPSPWPKSSIFDADEEKSKLLTRLLKSNHPEDLQAANRLIKNLV
KEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPGQAPPDQEALQVVYERCEKLR
PTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEGRVTFGNRVTSSLGDIPVS
RVFQNPAGCMKTCPLIDLEVDNGPAQMGTVVPSLLHQDLAALGISDAPVTGMVSGQNC
CEEKRNPSSSTLPGGGVQNPSADRNLLDLLSPQPAPCPLNYVSQKSVPKEVPPGTKSS
PGWSWEAGPLAPSPSSQNTPLAQVFVPLESVKPSSLPPLIVYDRNGFRILLHFSQTGA
PGHPEVQVLLLTMMSTAPQPVWDIMFQVAVPKSMRVKLQPASSSKLPAFSPLMPPAVI
SQMLLLDNPHKEPIRLRYKLTFNQGGQPFSEVGEVKDFPDLAVLGAA"
BASE COUNT 576 a 633 c 684 g 573 t
ORIGIN
1 cgccaggacg ctacagcagc tgaagaggca gtggcgcccg cggccgcggc gtcggggctg
61 gagcgatggc ggcgaccgcg gtggcggcgg ctgtggcggg aaccgagtcg gcccagggtc
121 ccccgggccc ggcagcgtcg ctggagctgt ggctgaacaa agccacagac ccaagcatgt
181 cggaacagga ttggtcagct atccagaatt tctgtgagca ggtgaacact gaccccaatg
241 gccccacaca tgcgccctgg ctactggccc acaagatcca gtctccgcaa gagaaggaag
301 ctctttatgc cttaacggtg ctggagatgt gcatgaacca ctgtggggag aagttccaca
361 gcgaggtggc caaatttcgt ttcctgaacg aactgatcaa agtgttgtcc ccaaagtacc
421 tggggtcctg ggccacagga aaagttaaag gaagagtcat tgaaatactc ttcagttgga
481 cagtctggtt tccggaagac atcaagattc gagacgctta tcagatgctg aagaaacaag
541 gaattataaa acaagaccct aaactaccag tggataaaat cttaccccca ccatctccct
601 ggcccaagag ctccatcttt gatgctgatg aagaaaagtc caagcttctg acaaggcttc
661 taaagagcaa ccaccccgag gaccttcagg ctgcaaaccg gttaatcaag aatttggtca
721 aggaggaaca agaaaaatcg gagaaggtgt ccaagagggt cagtgcggtg gaggaagtgc
781 gaagccatgt gaaggtgctg caggagatgc tgagcatgta ccgcaggcca gggcaggccc
841 cgcccgacca ggaggccctg caggtcgtgt atgagaggtg tgaaaagctg cggcccacgc
901 tgttccggtt ggcgagtgac accactgatg acgatgatgc actcgcggaa attctccagg
961 caaatgacct cctcacccaa ggagttctgc tgtacaaaca ggtgatggag ggccgggtca
1021 cctttggaaa cagagtgacc agctcattgg gagacatccc tgtctccaga gtctttcaga
1081 atccagcagg ctgcatgaag acctgccccc tgattgactt ggaggtggac aatggacctg
1141 cgcagatggg gactgtggtg ccatctttgc ttcatcagga cctggcagcc ttgggaatca
1201 gtgatgctcc tgttacaggc atggtttctg gtcagaattg ctgtgaggaa aagaggaatc
1261 cctcctccag cacgctgcca ggcggtggtg ttcagaaccc ttctgcagac aggaatttgc
1321 tggacctcct ctcaccacag ccagctccgt gccctctgaa ttatgtttcg cagaaaagtg
1381 tccccaagga agtgccacca ggtactaagt cctctccagg ttggtcctgg gaggctggcc
1441 cgttggctcc ttccccatct tcacagaata cacctctggc tcaagtgttt gtccctttgg
1501 agtctgttaa gcccagcagc ctgccgcctc tcattgtgta tgaccggaat ggattcagaa
1561 ttctgctcca cttctcccag acgggagccc ctgggcaccc agaggtacag gtgctgctct
1621 tgaccatgat gagcacggct ccccagcctg tctgggatat catgtttcaa gtggctgtgc
1681 caaagtcaat gagagtgaag ctgcagccgg catccagctc caagcttcct gcattcagtc
1741 ctttgatgcc tccagctgtg atatctcaga tgctgctgct tgacaatcca cacaaagaac
1801 ctatccgctt acggtacaag ctgacattca accaaggtgg acagcctttc agcgaagtag
1861 gagaagtgaa agacttccca gacctggctg tcttgggcgc agcctaactt ttcacaagat
1921 ggacccttca tttcaagctt aggctggcgt tacttttgct gtctagtcag gactaatcac
1981 ggtgtttcag tgcggagtgc caagagtcct atcctgacgt caggctctgg gtgtcaacct
2041 ctgacttatt ctgcagatgc tctgtgtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
2101 tgtgtgtgtg tgtgttcggg gagagggtgg tagcacaggg cttgggatat cggcagtgtg
2161 ggaaatgcga agcatttctc atcatcatca tctctgctac agtcatgttt ctgcatgtca
2221 gcgagcgaca ctgtccctgc ctcaggttgg aggttttatc agccaaagtg tttttttcat
2281 gtatcgttcg ttccattcat ccactctgtg ccttgtcagc ctttgaaagg cttggttgct
2341 cccaggctgc tgttctcagg gaccttaaaa gggacctggt tagtcttggg gcagagagta
2401 tctacttggg cactctcttc caagaaagac cttgtctcca ttttcaaaaa aaaaaaaaaa
2461 aaaaaa
//