LOCUS BC000278 1718 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens carbonic anhydrase XII, mRNA (cDNA clone MGC:1792
IMAGE:3357439), complete cds.
ACCESSION BC000278
VERSION BC000278.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1718)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1718)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: c Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 45935381.
FEATURES Location/Qualifiers
source 1..1718
/db_xref="H-InvDB:HIT000029484"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1792 IMAGE:3357439"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1718
/gene="CA12"
/gene_synonym="CAXII"
/gene_synonym="FLJ20151"
/gene_synonym="HsT18816"
/db_xref="GeneID:771"
/db_xref="HGNC:HGNC:1371"
/db_xref="MIM:603263"
CDS 113..1144
/gene="CA12"
/gene_synonym="CAXII"
/gene_synonym="FLJ20151"
/gene_synonym="HsT18816"
/codon_start=1
/product="carbonic anhydrase XII"
/protein_id="AAH00278.1"
/db_xref="GeneID:771"
/db_xref="HGNC:HGNC:1371"
/db_xref="MIM:603263"
/translation="MPRRSLHAAAVLLLVILKEQPSSPAPVNGSKWTYFGPDGENSWS
KKYPSCGGLLQSPIDLHSDILQYDASLTPLEFQGYNLSANKQFLLTNNGHSVKLNLPS
DMHIQGLQSRYSATQLHLHWGNPNDPHGSEHTVSGQHFAAELHIVHYNSDLYPDASTA
SNKSEGLAVLAVLIEMGSFNPSYDKIFSHLQHVKYKGQEAFVPGFNIEELLPERTAEY
YRYRGSLTTPPCNPTVLWTVFRNPVQISQEQLLALETALYCTHMDDPSPREMINNFRQ
VQKFDERLVYTSFSQGIILSLALAGILGICIVVVVSIWLFRRKSIKKGDNKGVIYKPA
TKMETEAHA"
BASE COUNT 397 a 520 c 434 g 367 t
ORIGIN
1 ctcgccacgg cacccaggct gcgcgcacgc ggtcccggtg tgcagctgga gagcgagcgg
61 ccaccgggag cccccggcac agcccgcgcc cgccccgcag gagcccgcga agatgccccg
121 gcgcagcctg cacgcggcgg ccgtgctcct gctggtgatc ttaaaggaac agccttccag
181 cccggcccca gtgaacggtt ccaagtggac ttattttggt cctgatgggg agaatagctg
241 gtccaagaag tacccgtcgt gtgggggcct gctgcagtcc cccatagacc tgcacagtga
301 catcctccag tatgacgcca gcctcacgcc cctcgagttc caaggctaca atctgtctgc
361 caacaagcag tttctcctga ccaacaatgg ccattcagtg aagctgaacc tgccctcgga
421 catgcacatc cagggcctcc agtctcgcta cagtgccacg cagctgcacc tgcactgggg
481 gaacccgaat gacccgcacg gctctgagca caccgtcagc ggacagcact tcgccgccga
541 gctgcacatt gtccattata actcagacct ttatcctgac gccagcactg ccagcaacaa
601 gtcagaaggc ctcgctgtcc tggctgttct cattgagatg ggctccttca atccgtccta
661 tgacaagatc ttcagtcacc ttcaacatgt aaagtacaaa ggccaggaag cattcgtccc
721 gggattcaac attgaagagc tgcttccgga gaggaccgct gaatattacc gctaccgggg
781 gtccctgacc acaccccctt gcaaccccac tgtgctctgg acagttttcc gaaaccccgt
841 gcaaatttcc caggagcagc tgctggcttt ggagacagcc ctgtactgca cacacatgga
901 cgacccttcc cccagagaaa tgatcaacaa cttccggcag gtccagaagt tcgatgagag
961 gctggtatac acctccttct cccaaggcat catcctctca ctggccctgg ctggcattct
1021 tggcatctgt attgtggtgg tggtgtccat ttggcttttc agaaggaaga gtatcaaaaa
1081 aggtgataac aagggagtca tttacaagcc agccaccaag atggagactg aggcccacgc
1141 ttgaggtccc cggagctccc gggcacatcc aggaaggacc ttgctttgga ccctacacac
1201 ttcggctctc tggacacttg cgacacctca aggtgttctc tgtagctcaa tctgcaaaca
1261 tgccaggcct cagggatcct ctgctgggtg cctccttgcc ttgggaccat ggccacccca
1321 gagccatccg atcgatggat gggatgcact ctcagaccaa gcagcaggaa ttcaaagctg
1381 cttgctgtaa ctgtgtgaga ttgtgaagtg gtctgaattc tggaatcaca aaccaagcca
1441 tgctggtggg ccattaatgg ttggaaaaca ctttcatccg gggctttgcc agagcgtgct
1501 ttcaagtgtc ctggaaagtc tgctgcttct ccaagctttc agacaagaat gtgcactctc
1561 tgcttaggtt ttgcttggga aactcaactt ctttcctctg gagacggggc atctccctct
1621 gatttccttc tgctatgaca aaacctttaa tctgcacctt acaactcggg gacaaatggg
1681 gacaggaagg atcaagttgt aaaaaaaaaa aaaaaaaa
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