LOCUS BC000263 3009 bp mRNA linear HUM 16-DEC-2006
DEFINITION Homo sapiens ubiquitin specific peptidase 10, mRNA (cDNA clone
MGC:2621 IMAGE:3501606), complete cds.
ACCESSION BC000263
VERSION BC000263.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3009)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3009)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24307888.
FEATURES Location/Qualifiers
source 1..3009
/db_xref="H-InvDB:HIT000029471"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2621 IMAGE:3501606"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3009
/gene="USP10"
/gene_synonym="KIAA0190"
/gene_synonym="MGC2621"
/gene_synonym="UBPO"
/db_xref="GeneID:9100"
/db_xref="HGNC:HGNC:12608"
/db_xref="MIM:609818"
CDS 114..2510
/gene="USP10"
/gene_synonym="KIAA0190"
/gene_synonym="MGC2621"
/gene_synonym="UBPO"
/codon_start=1
/product="ubiquitin specific peptidase 10"
/protein_id="AAH00263.1"
/db_xref="GeneID:9100"
/db_xref="HGNC:HGNC:12608"
/db_xref="MIM:609818"
/translation="MALHSPQYIFGDFSPDEFNQFFVTPRSSVELPPYSGTVLCGTQA
VDKLPDGQEYQRIEFGVDEVIEPSDTLPRTPSYSISSTLNPQAPEFILGCTASKITPD
GITKEASYGSIDCQYPGSALALDGSSNVEAEVLENDGVSGGLGQRERKKKKKRPPGYY
SYLKDGGDDSISTEALVNGHANSAVPNSVSAEDAEFMGDMPPPLTPRTCNSPQNSTDS
VSDIVPDSPFPGALGSDTRTAGQPEGGPGADFGQSCFPAEAGRDTLSRTAGAQPCVGT
DTTENLGVANGQILESSGEGTATNGVELHTTESIDLDPTKPESASPPADGTGSASGTL
PVSQPKSWASLFHDSKPSSSSPVAYVETKYSPPAISPLVSEKQVEVKEGLVPVSEDPV
AIKIAELLENVTLIHKPVSLQPRGLINKGNWCYINATLQALVACPPMYHLMKFIPLYS
KVQRPCTSTPMIDSFVRLMNEFTNMPVPPKPRQALGDKIVRDIRPGAAFEPTYIYRLL
TVNKSSLSEKGRQEDAEEYLGFILNGLHEEMLNLKKLLSPSNEKLTISNGPKNHSVNE
EEQEEQGEGSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESAT
LQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQEVEISRRVTLEKLPPVL
VLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELLSPGVKNKNFKCHRTYRLFAVVYH
HGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRVDLL
"
BASE COUNT 838 a 737 c 716 g 718 t
ORIGIN
1 gcgcaggcgc ggcggccgat gcgagtgtgt atgtgcgggc gagaagatgg cggcggcggg
61 ggaagcagcg tgagcagccg gaggatcgcg gagtcccaat gaaacgggca gccatggccc
121 tccacagccc gcagtatatt tttggagatt ttagccctga tgaattcaat caattctttg
181 tgactcctcg atcttcagtt gagcttcctc catacagtgg aacagttctg tgtggcacac
241 aggctgtgga taaactacct gatggacaag aatatcagag aattgagttt ggtgtcgatg
301 aagtcattga acccagtgac actttgccga gaacccccag ctacagtatt tcaagcacac
361 tgaaccctca ggcccctgaa tttattctcg gttgtacagc ttccaaaata acccctgatg
421 gtatcactaa agaagcaagc tatggctcca tcgactgcca gtacccaggc tctgccctcg
481 ctttggatgg aagttctaat gtggaggcgg aagttttgga aaatgatggt gtctcaggtg
541 gtcttggaca aagggagcgt aaaaagaaga aaaagcggcc acctggatat tacagctatt
601 tgaaagatgg tggcgatgat agtatctcca cagaagccct ggtcaatggc catgccaatt
661 cagcagtccc gaacagtgtc agtgcagagg atgcagaatt tatgggtgac atgcctccgc
721 cacttacgcc caggacttgt aacagccccc agaactccac agactctgtc agtgacattg
781 tgcctgacag tcctttcccc ggagcactcg gcagtgacac caggactgca gggcagccag
841 aggggggccc cggggctgat tttggtcagt cctgcttccc tgcagaggct ggcagagaca
901 ccctgtcaag gacagctggg gctcagccct gcgttggtac cgatactact gaaaaccttg
961 gagttgctaa tggacaaata cttgaatcct cgggtgaggg cacagctacc aacggggtgg
1021 agttgcacac cacggaaagc atagacttgg acccaaccaa acccgagagt gcatcacctc
1081 ctgctgacgg cacgggctct gcatcaggca cccttcctgt cagccagccc aagtcctggg
1141 ccagcctctt tcatgattct aagccctctt cctcctcgcc ggtggcctat gtggaaacta
1201 agtattcccc tcccgccata tctcccctgg tttctgaaaa gcaggttgaa gtcaaagaag
1261 ggcttgttcc ggtttcagag gatcctgtag ccataaagat tgcagagttg ctggagaatg
1321 taaccctaat ccataaacca gtgtcgttgc aaccccgtgg gctgatcaat aaagggaact
1381 ggtgctacat taatgctaca ctgcaggcat tggttgcttg cccgccgatg taccacctga
1441 tgaagttcat tcctctgtat tccaaagtgc aaaggccttg tacgtcaaca cccatgatag
1501 acagctttgt tcggctaatg aatgagttca ctaatatgcc agtacctcca aaaccccgac
1561 aagctcttgg agataaaatc gtgagggata ttcgccctgg agctgccttt gagcccacat
1621 atatttacag actcctgaca gttaacaagt caagcctgtc tgaaaagggt cgacaagaag
1681 atgctgagga atacttaggc ttcattctaa atggacttca tgaggaaatg ttgaacctaa
1741 agaagcttct ctcaccaagt aatgaaaaac ttacgatttc caacggcccc aaaaaccact
1801 cggtcaatga agaagagcag gaagaacaag gtgaaggaag cgaggatgaa tgggaacaag
1861 tgggcccccg gaacaagact tccgtcaccc gccaggcgga ttttgttcag actccaatca
1921 ccggcatttt tggtggacac atcaggtctg tggtttacca gcagagttca aaagaatctg
1981 ccactttgca gccatttttc acgttgcagt tggatatcca gtcagacaag atacgcacag
2041 tccaggatgc actggagagc ttggtggcaa gagaatctgt ccaaggttat accacaaaaa
2101 ccaaacaaga ggttgagata agtcgaagag tgactctgga aaaactccct cctgtcctcg
2161 tgctgcacct gaaacgattc gtttatgaga agactggtgg gtgccagaag cttatcaaaa
2221 atattgaata tcctgtggac ttggaaatta gtaaagaact gctttctcca ggggttaaaa
2281 ataagaattt taaatgccac cgaacctatc ggctctttgc agtggtctac catcacggca
2341 acagtgcgac gggcggccat tacactacag acgtcttcca gatcggtctg aatggctggc
2401 tgcgcatcga tgaccagaca gtcaaggtga tcaaccagta ccaggtggtg aaaccaactg
2461 ctgaacgcac agcctacctc ctgtattacc gccgagtgga cctgctgtaa accctgtgtg
2521 cgctgtgtgt gcgcccagtg cccgcttcgt aggacaccac ctcacactca cttcccgcct
2581 ctctttagtg gctctttaga gagaaactct ttctcccttt gcaaaaatgg gctagaatga
2641 aaaggagatg ccttggggtt cgtgcacaac acagcttctg ttgactctaa cttccaaatc
2701 aaaatcattt ggttgaaaca gactgttgct tgattttaga aaatacacaa aaacccatat
2761 ttctgaaata atgctgattc ctgagataag aaagtggatt tgatccccag tctcattgct
2821 tagtagaata aatcctgcac cagcaacaac acttgtaaat ttgtgaaaat gaattttatc
2881 tttccttaaa aaagaaattt tttaatccat cacacttttc ttccctaccc tttagttttt
2941 gataaatgat aaaaatgagc cagttatcaa agaagaacta gttcttactt caaaaaaaaa
3001 aaaaaaaaa
//