LOCUS BC000259 2598 bp mRNA linear HUM 06-DEC-2004
DEFINITION Homo sapiens family with sequence similarity 53, member C, mRNA
(cDNA clone MGC:821 IMAGE:3357346), complete cds.
ACCESSION BC000259
VERSION BC000259.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2598)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2598)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: g Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7706138.
FEATURES Location/Qualifiers
source 1..2598
/db_xref="H-InvDB:HIT000029467"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:821 IMAGE:3357346"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2598
/gene="FAM53C"
/gene_synonym="C5orf6"
/db_xref="GeneID:51307"
CDS 188..1366
/gene="FAM53C"
/gene_synonym="C5orf6"
/codon_start=1
/product="FAM53C protein"
/protein_id="AAH00259.1"
/db_xref="GeneID:51307"
/translation="MITLITEQLQKQTLDELKCTRFSISLPLPDHADISNCGNSFQLV
SEGASWRGLPHCSCAEFQDSLNFSYHPSGLSLHLRPPSRGNSPKEQPFSQVLRPEPPD
PEKLPVPPAPPSKRHCRSLSVPVDLSRWQPVWRPAPSKLWTPIKHRGSGGGGGPQVPH
QSPPKRVSSLRFLQAPSASSQCAPAHRPYSPPFFSLALAQDSSRPCAASPQSGSWESD
AESLSPCPPQRRFSLSPSLGPQASRFLPSARSSPASSPELPWRPRGLRNLPRSRSQPC
DLDARKTGVKRRHEEDPRRLRPSLDFDKMNQKPYSGGLCLQETAREGSSISPPWFMAC
SPPPLSASCSPTGGSSQVLSESEEEEEGAVRWGRQALSKRTLCQRDFGDLDLNLIEEN
"
BASE COUNT 583 a 732 c 698 g 585 t
ORIGIN
1 ctccggccgc ggccctggga gctggaggaa ccgcgactca gcaggcatga ctggagaggg
61 aagtcccaat ggtgctagaa tggtgctgca gtggcagaag acggctcaca agtgaggtct
121 ggaagaacaa cagggaagac atccatcatt tgctccaaag tgtgcaagtc aaatcctggg
181 gagaatcatg ataaccctga tcactgagca gctacagaag cagactctgg atgagctgaa
241 atgcacacgc ttcagcatca gtctgccttt gcctgatcat gcagacatct ccaactgtgg
301 gaactctttc cagcttgtgt ctgaaggtgc ttcctggagg ggcctgcccc actgttcctg
361 tgctgagttc caggacagcc tcaacttcag ctaccatccc tcaggcctga gcctgcacct
421 cagaccaccc agtcggggaa actcccccaa ggagcagccc ttctcccaag tcctaagacc
481 tgagccccca gatccagaga agcttcctgt gccccctgcc cctccatcca agaggcactg
541 ccgctcactc tcagtgcccg tggacctgtc tcgctggcag ccggtgtggc ggcccgcccc
601 ctccaagctg tggactccca taaagcaccg gggcagtggt ggagggggtg ggccgcaggt
661 gcctcaccag agccccccaa agcgggtctc cagcctcagg ttcctccaag ctcccagtgc
721 ctcttctcaa tgtgccccag ctcacagacc ctacagccct cctttcttca gcctggccct
781 ggcccaagat tcctctcgac cctgcgccgc ctcccctcaa agtggctcct gggagagtga
841 tgctgagtcc ttgtcacctt gcccacctca gcgccgcttc tccctgtcac ccagtctggg
901 cccgcaggca agccgcttct tgccctctgc ccggagctct cccgcatcct ccccagagct
961 gccctggcga cctcgaggtc tccgcaacct tccccgaagc cgctcacagc cttgtgatct
1021 ggatgcccgc aaaactgggg tcaagcggcg ccacgaggaa gacccccggc gtctgcggcc
1081 ttcgttggac tttgacaaga tgaatcagaa accatactca ggaggtcttt gtctccaaga
1141 aacagcccgg gaaggcagca gcatctctcc accatggttc atggcctgta gccccccacc
1201 cctctctgct tcctgcagcc ccactggggg ttcctcccag gtgctgagtg aaagcgaaga
1261 ggaggaggag ggggctgtgc ggtggggtcg gcaggcgctg agcaagcgga cactgtgcca
1321 gcgggacttt ggggacctgg acttgaattt gattgaggaa aactaaaact gagaggctac
1381 ttcctggggc cacacagact gactctctca tggctactaa caagtgtcga gtccccaagg
1441 ctgggggccg agcctgggaa tgggggtgag tggagggctc cgactcaggg cagctggaaa
1501 tcttctcgct ccagcaagct cgaccatgcc aagagactgg ccgggacaag ataaacggag
1561 ctggtggcgg gagggacagc cccagagcag acccttccta tggcggccct gagtgtgagt
1621 atccctgcca ccaagagagc aatgggcagg gaaggaaggg gtctgccgac cccagctcgg
1681 ggaatttcac tagccccttt gcttcaaagg gcacttgtgt cttagaattt ggccagggtg
1741 gggggttgag tcagcctcct cagagaaact gcgtgagagt gtgtgcgtgc atgggagtgt
1801 acttgtggaa aggtgtgttt gcgtagcctt agggaaggaa ggcaattgct ccttaacagc
1861 agagtatcat gataccccca ggatcttgag ttttttacag gatgttgggt ttgctcaagg
1921 agtcaagagg agggcaccaa gttttccatt actttcagtc tggaaaacta agctagtcag
1981 aactgtcatc ttgcttccca atctaagaac ctgtggccct ggaacacttt tcaagaattg
2041 gttcattttg ctttacacag tagatctgtt ccaacagttc tgtgtaaacc aaatgctatt
2101 tttcaatgca tttggactgc tgaccattta aaagcagcct atgattgctt ctttttgtaa
2161 agcaagcaac ctccctccac tttagctgtt ttgactattt gaattttcac atattgggct
2221 tacccagagt ggagcacacc tccagggcat gtggctgaca ctgggtcaat gtctgcatct
2281 gtgctgtgtg tgtagtgtgg ttggccagta ggtgagtatc cctgtgtgtg tgagtgaagc
2341 cactccccag gctggtgctc tcctcctgtg cccagtgact gcccagtggc agctcagctg
2401 cccttcactc ccacctgctg ccaaagtccc tgtgctaatg ggattacaaa tacaaaaagt
2461 ggaaaaaaat tttcgtaaac tttgttttat attaaaagaa aaatccataa gtctgtgtgt
2521 gttaaacatg aggttctgcc tctgtggctg tgtttgaaaa aataaagttt tattagaata
2581 aaaaaaaaaa aaaaaaaa
//