LOCUS BC000255 1127 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens FUN14 domain containing 2, mRNA (cDNA clone MGC:2495
IMAGE:3355861), complete cds.
ACCESSION BC000255
VERSION BC000255.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1127)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1127)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: k Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 63054874.
FEATURES Location/Qualifiers
source 1..1127
/db_xref="H-InvDB:HIT000029465"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:2495 IMAGE:3355861"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1127
/gene="FUNDC2"
/gene_synonym="DC44"
/gene_synonym="HCBP6"
/gene_synonym="HCC3"
/gene_synonym="MGC2495"
/gene_synonym="PD03104"
/db_xref="GeneID:65991"
/db_xref="HGNC:HGNC:24925"
CDS 98..667
/gene="FUNDC2"
/gene_synonym="DC44"
/gene_synonym="HCBP6"
/gene_synonym="HCC3"
/gene_synonym="MGC2495"
/gene_synonym="PD03104"
/codon_start=1
/product="FUN14 domain containing 2"
/protein_id="AAH00255.2"
/db_xref="GeneID:65991"
/db_xref="HGNC:HGNC:24925"
/translation="METSAPRAGSQVVATTARHSAAYRADPLRVSSRDKLTEMAASSQ
GNFEGNFESLDLAEFAKKQPWWRKLFGQESGPSAEKYSVATQLFIGGVTGWCTGFIFQ
KVGKLAATAVGGGFFLLQLANHTGYIKVDWQRVEKDMKKAKEQLKIRKSNQIPTEVRS
KAEEVVSFVKKNVLVTGGFFGGFLLGMAS"
BASE COUNT 299 a 274 c 294 g 260 t
ORIGIN
1 gtgacaccgc acgctgagct ctgtgatgta gccgcttgcg gagactgcaa gcagccgcgg
61 cgcgcccggc cctccctctt ccgctgccgc cgtgggaatg gaaacatctg ccccacgtgc
121 cggaagccaa gtggtggcga caactgcgcg ccactccgcg gcctaccgcg cagatcctct
181 acgtgtgtcc tcgcgagaca agctcaccga aatggccgcg tccagtcaag gaaactttga
241 gggaaatttt gagtcactgg accttgcgga atttgctaag aagcagccat ggtggcgtaa
301 gctgttcggg caggaatctg gaccttcagc agaaaagtat agcgtggcaa cccagctgtt
361 cattggaggt gtcactggat ggtgcacagg tttcatattc cagaaggttg gaaagttggc
421 tgcaacagct gtgggaggtg gattttttct ccttcagctt gcaaaccata ctgggtacat
481 caaagttgac tggcaacgag tggagaagga catgaagaaa gccaaagagc agctgaagat
541 ccgtaagagc aatcagatac ctactgaggt caggagcaaa gctgaggagg tggtgtcatt
601 tgtgaagaag aatgttctag taactggggg atttttcgga ggctttctgc ttggcatggc
661 atcctaagga agatgacctc atgttcattg ttcctggttt tttccagcca gcagcctcta
721 cactccatca taggacatcg agtccctcct cctcttctcc catgccttct tccctgccat
781 ggcaaatctg agtggcttct ctaagcatct gctggtacaa gtcaatgtgg caccatgagc
841 ttcatggtgg cagaagagac aatagtcctt agctctcctc ccagtacacc ccctacttgg
901 ccagtctgta ggccaacaag aaggttcctt tacccccatg caagacactt atgagaacac
961 attacaagat ggctgaccgt ggaggatgag tggatcctga aaggttgtcc caaactgttg
1021 atttggaaaa gaaataagca catagataac cttattgtgt gctgcatgga aaggaactga
1081 atacatttgc ctttaagcat gaaagaaaaa aaaaaaaaaa aaaaaaa
//