LOCUS BC000238 2460 bp mRNA linear HUM 11-AUG-2006
DEFINITION Homo sapiens ankyrin repeat and zinc finger domain containing 1,
mRNA (cDNA clone MGC:969 IMAGE:3351742), complete cds.
ACCESSION BC000238
VERSION BC000238.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: o Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8922412.
FEATURES Location/Qualifiers
source 1..2460
/db_xref="H-InvDB:HIT000029450"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:969 IMAGE:3351742"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2460
/gene="ANKZF1"
/gene_synonym="FLJ10415"
/gene_synonym="ZNF744"
/db_xref="GeneID:55139"
/db_xref="HGNC:HGNC:25527"
CDS 57..2237
/gene="ANKZF1"
/gene_synonym="FLJ10415"
/gene_synonym="ZNF744"
/codon_start=1
/product="ankyrin repeat and zinc finger domain containing
1"
/protein_id="AAH00238.1"
/db_xref="GeneID:55139"
/db_xref="HGNC:HGNC:25527"
/translation="MSPAPDAAPAPASISLFDLSADAPVFQGLSLVSHAPGEALARAP
RTSCSGSGERESPERKLLQGPMDISEKLFCSTCDQTFQNHQEQREHYKLDWHRFNLKQ
RLKDKPLLSALDFEKQSSTGDLSSISGSEDSDSASEEDLQTLDRERATFEKLSRPPGF
YPHRVLFQNAQGQFLYAYRCVLGPHQDPPEEAELLLQNLQSRGPRDCVVLMAAAGHFA
GAIFQGREVVTHKTFHRYTVRAKRGTAQGLRDARGGPSHSAGANLRRYNEATLYKDVR
DLLAGPSWAKALEEAGTILLRAPRSGRSLFFGGKGAPLQRGDPRLWDIPLATRRPTFQ
ELQRVLHKLTTLHVYEEDPREAVRLHSPQTHWKTVREERKKPTEEEIRKICRDEKEAL
GQNEESPKQGSGSEGEDGFQVELELVELTVGTLDLCESEVLPKRRRRKRNKKEKSRDQ
EAGAHRTLLQQTQEEEPSTQSSQAVAAPLGPLLDEAKAPGQPELWNALLAACRAGDVG
VLKLQLAPSPADPRVLSLLSAPLGSGGFTLLHAAAAAGRGSVVRLLLEAGADPTVQDS
RARPPYTVAADKSTRNEFRRFMEKNPDAYDYNKAQVPGPLTPEMEARQATRKREQKAA
RRQREEQQQRQQEQEEREREEQRRFAALSDREKRALAAERRLAAQLGAPTSPIPDSAI
VNTRRCWSCGASLQGLTPFHYLDFSFCSTRCLQDHRRQAGRPSS"
BASE COUNT 602 a 655 c 709 g 494 t
ORIGIN
1 gagccgctca gctcccggga cgtttggagc tgctgctaaa taatttctgc tcagccatgt
61 cgccggctcc agatgcagcc ccggctcctg cgtcgatctc cctgtttgac ctcagcgcgg
121 atgctccggt ctttcagggc ctgagcctgg tgagccacgc gcctggggag gctctggccc
181 gggctccgcg tacttcctgt tcaggctcag gggagagaga aagcccagaa agaaagctac
241 tccagggtcc tatggatatt tcagagaagt tattttgttc aacttgtgac cagaccttcc
301 agaaccacca agaacagagg gaacattata agcttgactg gcatcggttt aacctaaagc
361 aacgtctcaa ggacaagcct ctcctgtctg ccctggactt tgaaaagcag agctccacag
421 gagatctttc cagcatctcg ggatcagaag actcagactc agccagtgag gaggacttgc
481 agacactgga tcgggagagg gctacatttg agaagttgag ccgaccccca ggcttttacc
541 ctcatcgagt tcttttccag aatgcccagg gccagtttct ttatgcctac cgctgtgtcc
601 taggccctca tcaggatccc ccagaagagg cagaactgct gctacagaac ctgcaaagta
661 gaggtcccag agactgcgtg gtgctcatgg ctgcagctgg gcactttgct ggtgctatat
721 ttcaaggaag agaagtggtg acacacaaaa cttttcaccg ctatacggtt cgggccaagc
781 ggggcacagc ccaggggctt cgggatgccc gaggtgggcc atcacactct gctggagcca
841 acctgaggcg ctacaatgaa gccacactat ataaggatgt tcgtgacctg ctggcagggc
901 caagctgggc taaggcgctg gaggaggctg gtacaatact gttgcgtgct ccccgctctg
961 gccggtcttt gttctttgga ggcaagggag cacccctgca aaggggggat ccccgacttt
1021 gggatatccc cctcgccacc cgcagaccca ccttccaaga gctacagcgt gtgctccata
1081 agctgaccac tttgcatgtc tatgaagaag accctcggga agcagtcaga ctgcactcac
1141 ctcagacaca ctggaaaaca gtaagagagg agagaaagaa gcctactgag gaagaaataa
1201 gaaagatctg cagggatgaa aaggaagcgc tggggcagaa tgaggaatct cccaaacagg
1261 gttcagggtc ggagggagaa gatggctttc aggtagagtt ggagctagtg gagttgactg
1321 tggggactct ggatctttgt gagtctgaag tattgcccaa gcggaggagg agaaaaagga
1381 ataagaagga gaaaagccga gaccaggagg ctggggcaca tcggactctt ctccagcaaa
1441 ctcaagaaga ggagccttcc acacagtcat cccaggcagt tgctgccccc ttgggccctt
1501 tgctggatga ggccaaagcc cctggtcagc cagagctctg gaatgcactg cttgctgctt
1561 gccgagctgg agatgttgga gtgctaaagc tgcagctagc tcccagccct gcagacccta
1621 gagttctgtc tctgctcagt gcccccttgg gctccggtgg ctttactctc ctgcatgcag
1681 cagctgcagc tggaagaggc tcagtggttc gtctgctgct ggaagcaggt gctgacccca
1741 ctgtgcagga ctctcgggcc cggccacctt atactgttgc ggctgacaaa tcaacacgta
1801 atgagttccg aaggttcatg gagaagaatc cagatgccta cgattacaac aaggctcagg
1861 tgccaggacc attgacacca gaaatggagg cacggcaggc tacacggaaa agggagcaga
1921 aggcagcccg gcggcaacgg gaggaacagc agcagaggca gcaggagcag gaggagcgtg
1981 aacgagaaga gcagcggcga tttgccgccc tcagtgaccg agagaagaga gctctggctg
2041 cagagcgccg actcgctgcc cagttgggag cccctacctc tccaatccct gactctgcaa
2101 tcgtcaatac tcgacgctgc tggagttgtg gggcatccct ccaaggcctg actccctttc
2161 actacctcga cttctctttc tgctccacac gttgcctcca ggatcatcgc cgtcaggcag
2221 ggaggccctc ttcctgatct cttacagctc tacctggggc caactcaggg acctgagagg
2281 gcacattcac agcagcccta gtttttttct tccccgtgaa accagagatg atttggaaga
2341 tgggggtgaa ggacactcgg gaactagggc aaagacaggg ctagaggtat gtggagctgg
2401 tactgtctct ggaattttaa tcacaataaa gtttggcaag gaaaaaaaaa aaaaaaaaaa
//