LOCUS BC000225 1964 bp mRNA linear HUM 22-AUG-2008
DEFINITION Homo sapiens regulation of nuclear pre-mRNA domain containing 1A,
mRNA (cDNA clone MGC:3112 IMAGE:3350951), complete cds.
ACCESSION BC000225
VERSION BC000225.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1964)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1964)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: e Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361708.
FEATURES Location/Qualifiers
source 1..1964
/db_xref="H-InvDB:HIT000050382"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3112 IMAGE:3350951"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1964
/gene="RPRD1A"
/gene_synonym="HsT3101"
/gene_synonym="P15RS"
/db_xref="GeneID:55197"
/db_xref="HGNC:HGNC:25560"
/db_xref="MIM:610347"
CDS 294..1124
/gene="RPRD1A"
/gene_synonym="HsT3101"
/gene_synonym="P15RS"
/codon_start=1
/product="RPRD1A protein"
/protein_id="AAH00225.2"
/db_xref="GeneID:55197"
/db_xref="HGNC:HGNC:25560"
/db_xref="MIM:610347"
/translation="MRNSNWRFCQTGIYSKPNRKLTFLYLANDVIQNSKRKGPEFTKD
FAPVIVEAFKHVSSETDESCKKHLGRVLSIWEERSVYENDVLEQLKQALYGDKKPRKR
TYEQIKVDENENCSSLGSPSEPPQTLDLVRALQDLENAASGDAAVHQRIASLPVEVQE
VSLLDKITDKESGERLSKMVEDACMLLADYNGRLAAEIDDRKQLTRMLADFLRCQKEA
LAEKEHKLEEYKRKLARVSLVRKELRSRIQSLPDLSRLPNVTGSHMHLPFAGDIYSED
"
BASE COUNT 603 a 385 c 466 g 510 t
ORIGIN
1 gaagcggcgg ccgtggtgag agcgtgggga agggtggggt gagggggcga ggccgcagct
61 agggcggcga aactctcctc ccctcggccc caccgcgtgg gacggcgtga acgtggtgtc
121 ggagggatgt cagccttctc tgaggcggcg ctggagaaga agctgtcgga gttgagcaac
181 tcgcagcaga gcgtgcagac cttgtccctg tggctcattc accaccgtaa acactcgcgt
241 cccatcgtca ccgtgtggga gcgggagctg cggaaagagt ggaggtgcaa caaatgagaa
301 attccaattg gagattttgt caaacaggaa tttactccaa accaaacagg aagcttactt
361 ttctctacct agccaatgat gtcatacaga acagcaagag gaaggggcca gagtttacaa
421 aagattttgc accagttata gtggaggctt ttaagcatgt ttcaagtgaa actgatgaaa
481 gttgtaagaa gcaccttgga agagtgttat ctatttggga agaaaggtct gtttatgaaa
541 atgatgtatt agaacaactt aaacaagctc tgtatggtga taagaagcct aggaagcgaa
601 cttatgaaca gataaaggtg gatgaaaatg aaaactgttc ctctctggga tctccaagtg
661 aaccaccaca gactctagat ctcgttagag cattacaaga tctggaaaat gcagcctcag
721 gtgatgcagc agttcatcag aggatagctt ctttacctgt tgaagtccaa gaagtatctc
781 tattagataa aataacagat aaagaatctg gagaaaggct ttccaaaatg gtagaggatg
841 cgtgtatgtt gctggcagat tacaatggca gattggcggc agaaatagat gatagaaagc
901 aactcactcg aatgttagca gattttcttc gttgtcaaaa ggaagccctt gcagagaaag
961 agcataaatt ggaagagtac aagcgcaagc tagccagagt ttccctggtg cgcaaagaac
1021 tcaggtcccg gatccagagc ctgccagact tatctcgatt gcccaatgtc actggcagcc
1081 acatgcacct gccctttgcg ggagacatct acagtgaaga ttgatggacc agcctctttc
1141 caggtcccag gactttgcaa gagatggaga cagtgcagag agctgtctgg agtcacaatc
1201 tgaacagatt ctcgggcgct ccttctctcc ttccatcact acagtaagta aaaggaccat
1261 agaggggaac caggaatctg agaatcagct gtgctcaata gccaacctcc ctgtccagat
1321 gcagctattt tggtatctcc tatcacatgc actctgaatc agggtttttc tataagaaat
1381 ctttcagaat cagcaaaagt ggggatgacc caggcatctt gatttgcaaa atcacaaaac
1441 taagttgtca gttatcactg tagatgagca actcatcttt ttaaagtata gttactgaac
1501 tgattctgag aaatctttag agagaaaaaa ctcaacagta caaattaact aattgggaaa
1561 gttagaatgt cctttctgaa tttttcatta aaaaaattac attatctgaa ataacataaa
1621 gctactaaac tgctttgtat tctattaaga aatagctcct aaggatgtag tcttgtttca
1681 tagttgttgc actatatcaa aacttaaaat gtaagcccag ttcttctctg tatagaaagg
1741 aaacattgtg ttacttaatg aattatttat acagagcatt tgttgccaac tgttgttcca
1801 gccatccaca caggagtctg ttctgaggtg gcaatagcac atgggaagat gaactttccc
1861 tgtttgttta cccgttcttc tttggctgta tctgatgaca gtataagatg ttcttaataa
1921 agttttatgt tctttttgaa atgtgaaaaa aaaaaaaaaa aaaa
//