LOCUS BC000224 1830 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens sulfatase modifying factor 2, mRNA (cDNA clone
IMAGE:3351504), partial cds.
ACCESSION BC000224
VERSION BC000224.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1830)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1830)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (14-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: a Column: 11.
FEATURES Location/Qualifiers
source 1..1830
/db_xref="H-InvDB:HIT000085810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3351504"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1830
/gene="SUMF2"
/gene_synonym="pFGE"
/db_xref="GeneID:25870"
/db_xref="HGNC:HGNC:20415"
/db_xref="MIM:607940"
CDS <1..729
/gene="SUMF2"
/gene_synonym="pFGE"
/codon_start=1
/product="SUMF2 protein"
/protein_id="AAH00224.1"
/db_xref="GeneID:25870"
/db_xref="HGNC:HGNC:20415"
/db_xref="MIM:607940"
/translation="AAAPAVAPGRRVAQARDFVREKKYRTEAEMFGWSFVFEDFVSDE
LRNKATQPMKSVLWWLPVEKAFWRQPAGPGSGIRERLEHPVLHVSWNDARAYCAWRGK
RLPTEEEWEFAARGGLKGQVYPWGNWFQPNRTNLWQGKFPKGDKAEDGFHGVSPVNAF
PAQNNYGLYDLLGNVWEWTASPYQAAEQDMRVLRGASWIDTADGSANHRARVTTRMGN
TPDSASDNLGFRCAADAGRPPGEL"
BASE COUNT 444 a 467 c 479 g 440 t
ORIGIN
1 gctgctgccc ctgctgtcgc tcctggtcgg cgcgtggctc aagctaggga ttttgtcagg
61 gagaaaaagt atcggacaga agctgagatg tttggatgga gctttgtctt tgaggacttt
121 gtctctgatg agctgagaaa caaagccacc cagccaatga agtctgtact ctggtggctt
181 ccagtggaaa aggcattttg gaggcagcct gcaggtcctg gctctggcat ccgagagaga
241 ctggagcacc cagtgttaca cgtgagctgg aatgacgccc gtgcctactg tgcttggcgg
301 ggaaaacgac tgcccacgga ggaagagtgg gagtttgccg cccgaggggg cttgaagggt
361 caagtttacc catgggggaa ctggttccag ccaaaccgca ccaacctgtg gcagggaaag
421 ttccccaagg gagacaaagc tgaggatggc ttccatggag tctccccagt gaatgctttc
481 cccgcccaga acaactacgg gctctatgac ctcctgggga acgtgtggga gtggacagca
541 tcaccgtacc aggctgctga gcaggacatg cgcgtcctcc ggggggcatc ctggatcgac
601 acagctgatg gctctgccaa tcaccgggcc cgggtcacca ccaggatggg caacactcca
661 gattcagcct cagacaacct cggtttccgc tgtgctgcag acgcaggccg gccgccaggg
721 gagctgtaag cagccgggtg gtgacaagga gaaaagcctt ctagggtcac tgtcattccc
781 tggccatgtt gcaaacagcg caattccaag ctcgagagct tcagcctcag gaaagaactt
841 ccccttccct gtctcccatc cctctgtggc aggcgcctct caccagggca ggagaggact
901 cagcctcctg tgttttggag aaggggccca atgtgtgttg acgatggctg ggggccaggt
961 gtttctgtta gaggccaagt attattgaca caggattgca aacacacaaa caattggaac
1021 agagcactct gaaaggccat tttttaagca ttttaaaatc tattctctcc ccctttctcc
1081 ctggatgatt caggaagctg acattgtttc ctcaaggcag aattttcctg gttctgtttt
1141 ctcagccagt tgctgtggaa ggagaatgct ttctttgtgg cctcatctgt ggtttcgtgt
1201 ccctctgaag gaaactagtt tctactgtgt aacaggcaga catgtaacta tttaaagcac
1261 agttcagtcc taaaagggtc tgggagaacc agatgatgta ctaggtgaag cattgcattg
1321 tgggaatcac aaagcaaata gtactccaga aagacaaata tcagaagctt cctattcttt
1381 tttttttttt tttttttttt gagacagggt ctttctctgt tgcccaggct agagtgcact
1441 ggtgatcacg gctcactcta gccttgaatt cctgggccca agcaattctc ccacctcagc
1501 ctcctgagta gctgggacta caagtgtgca ccaccatgcc tggctaattt tttgaatttt
1561 tgtagtgatg ggatctcgct ctgttgccca gggtggtctc gaactcctgg cctcaagcga
1621 tcctcccacc tcgacctccc aaagtgctgg gattacaggt gtgagccacc tcgcctgggc
1681 ccccttctcc atatgcctcc aaaaacatgt ccctggagag tagcctgctc ccacactgtc
1741 actggatgtc atggggccaa taaaatctcc tgcaattgtg tatctcaaaa aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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