LOCUS BC000213 1148 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens ring finger protein 24, mRNA (cDNA clone MGC:1815
IMAGE:2958640), complete cds.
ACCESSION BC000213
VERSION BC000213.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1148)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1148)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC000213.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: c Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 10518498.
FEATURES Location/Qualifiers
source 1..1148
/db_xref="H-InvDB:HIT000029436"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:1815 IMAGE:2958640"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1148
/gene="RNF24"
/gene_synonym="G1L"
/db_xref="GeneID:11237"
CDS 186..632
/gene="RNF24"
/gene_synonym="G1L"
/codon_start=1
/product="RNF24 protein"
/protein_id="AAH00213.1"
/db_xref="GeneID:11237"
/translation="MSSDFPHYNFRMPNIGFQNLPLNIYIVVFGTAIFVFILSLLFCC
YLIRLRHQAHKEFYAYKQVILKEKVKELNLHELCAVCLEDFKPRDELGICPCKHAFHR
KCLIKWLEVRKVCPLCNMPVLQLAQLHSKQDRGPPQGPLPGAENIV"
misc_feature 417..551
/gene="RNF24"
/gene_synonym="G1L"
/note="COG5540; Region: RING-finger-containing ubiquitin
ligase [Posttranslational modification, protein turnover,
chaperones]"
/db_xref="CDD:COG5540"
BASE COUNT 287 a 307 c 281 g 273 t
ORIGIN
1 gccacctccg ccgcgctctg tccggacgga cgctcgccgc ccgcagcctg ccgcccgccg
61 cagggcgctg acggtcccgc acgtctgccg ctgccaccgg cgcgcccgaa acttccagca
121 ctatgttgaa taagagtggt gagagcagat atcctgcctt gttcccggtc ttagggggtt
181 catccatgag ctcggatttc ccacattaca acttcaggat gcctaatatt ggattccaga
241 atctgcctct caacatatat attgtggttt ttggtactgc tatatttgtc ttcatcctta
301 gtttactctt ctgttgctac ttgattaggc taagacatca agcacacaaa gaattttatg
361 cctacaaaca ggttatatta aaagagaaag taaaagaatt gaatttacat gagctctgtg
421 cagtgtgcct agaagacttc aagcctcgag atgagttggg gatttgccca tgtaagcacg
481 ccttccacag aaagtgcctt attaagtggc tggaggttcg taaagtgtgt cccctgtgca
541 acatgccagt tctacagctg gcccagttgc acagtaagca ggaccgtgga ccccctcagg
601 ggccccttcc tggggcagag aacattgtat agcttaccgc aaggatcaga ctgttgctgg
661 acacgacgtc tgtgtggagc caggaggaac acatgtggtg tctgtatggc tgctctctac
721 ctaggacacc agctgccact tcttttgcct catgaagaac tcttgggcca gccaaactgg
781 gaacctaggt gtctgggtct tgtgacaacc aaagcacttt gacactaccc cctgccgaga
841 gaagaggagt ggatgagcct gcgggtttgc ctcaagaaac ttcatgaggg tctcttacta
901 actccattac actctctctc ctggagcctc atctccatgt caagcaggag ggtaaagaag
961 ggaactaaga gcaggtcttt caagccacac ccccacctgc ggatggatgg gtttctctgt
1021 aggccatgca ggcctttgtt tcagcaaacc ttcccagcag cccttgagcc aagtaaaacc
1081 agcacaacca gccaccagtg gttggtgagg cagtgcccac aaggcttaaa aaaaaaaaaa
1141 aaaaaaaa
//