LOCUS BC000210 1640 bp mRNA linear HUM 16-SEP-2003 DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 50, mRNA (cDNA clone IMAGE:3351405), partial cds. ACCESSION BC000210 VERSION BC000210.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1640) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1640) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield, Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin, Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott, Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy, George Yang, Scott Zuyderduyn, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: c Column: 9. FEATURES Location/Qualifiers source 1..1640 /db_xref="H-InvDB:HIT000085806" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3351405" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1640 /gene="DDX50" /gene_synonym="GU2" /gene_synonym="GUB" /gene_synonym="MGC3199" /gene_synonym="RH-II/GuB" /db_xref="GeneID:79009" CDS <1..1405 /gene="DDX50" /gene_synonym="GU2" /gene_synonym="GUB" /gene_synonym="MGC3199" /gene_synonym="RH-II/GuB" /codon_start=2 /product="DDX50 protein" /protein_id="AAH00210.1" /db_xref="GeneID:79009" /translation="KDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWS QRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREIT LKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGIC ICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFR PSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQDVSCA WKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAKLP EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR SGNRNRSRSGGHKRSFD" misc_feature 5..769 /gene="DDX50" /gene_synonym="GU2" /gene_synonym="GUB" /gene_synonym="MGC3199" /gene_synonym="RH-II/GuB" /note="SrmB; Region: Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]" /db_xref="CDD:COG0513" BASE COUNT 501 a 298 c 388 g 453 t ORIGIN 1 caaagaccat ctgcagagtg gccgattgga tctttctaaa ctgcgacatg ttgtgcttga 61 tgaagtggat cagatgttag atttaggttt cgctgaacaa gttgaagata ttattcatga 121 atcctacaaa actgattctg aagacaatcc tcagacttta cttttttctg caacttgccc 181 acagtgggta tacaaagttg caaaaaaata catgaaatcc agatatgaac aggttgacct 241 tgttggaaaa atgactcaaa aggctgcaac tactgtggaa catttggcca tccagtgtca 301 ttggtctcag aggccagcag ttattggaga tgtccttcaa gtctacagtg ggtctgaagg 361 gagggctatt attttctgtg agaccaagaa gaatgtaact gaaatggcca tgaatccaca 421 cataaaacag aatgcccagt gtttacatgg ggacattgca cagtcacaaa gagaaattac 481 actaaaaggc ttcagagaag gtagttttaa agttttggtg gcaaccaatg tggctgcccg 541 tggtttggac attcctgaag ttgacctggt gattcaaagt tctcctcctc aggatgttga 601 gtcctatatc catcgctctg gacgcacagg tagagctgga cggacaggga tttgtatatg 661 tttttatcaa ccaagagaaa gaggtcaact aagatatgtg gaacaaaaag caggaattac 721 ttttaaacgt gtaggtgttc cttctacaat ggatttagtt aaatctaaaa gcatggatgc 781 catcaggtct ctggcttccg tttcttatgc tgctgttgat tttttccgac catcagctca 841 gagactgata gaagagaaag gtgcagtgga tgcattggct gcagctttag cccacatttc 901 tggtgcatca agctttgaac cacgatcttt gatcacctct gataaggggt ttgtgaccat 961 gactctggaa agcctagagg aaatacagga tgtcagctgt gcttggaaag aacttaacag 1021 aaagctgagt agtaatgcag tgtctcagat taccagaatg tgcctcctga aaggaaatat 1081 gggtgtttgc tttgatgttc ctacaactga gtcagaaagg ttacaggcag agtggcatga 1141 ttccgactgg atactctcag tgccagccaa attacctgaa attgaagaat attatgatgg 1201 aaacacatct tctaattcca gacagaggag tggctggtca agtggtcgat caggccggtc 1261 aggccggtca ggtggtcgat ctggcggccg gtcaggtaga cagagtcgac aaggaagtcg 1321 ctcaggaagt cgacaagatg gtagaagacg aagtgggaat agaaatcgat caagaagtgg 1381 gggccacaaa cggagttttg actgagtatt tgatagttaa tctaccagtg tgagcttgcc 1441 tatttctgcc taatcatgta cattatccac caaaaattag gtcatcatag ttgaggtatg 1501 tgtctgctat ttgcaaagaa gttggtcgta tttttttaaa aagtatttca caagaatgga 1561 acaaatctac ttatccagtt atacctttga ataaaaaaac ctccttttat tgtctctttt 1621 caaaaaaaaa aaaaaaaaaa //