LOCUS       BC000210                1640 bp    mRNA    linear   HUM 16-SEP-2003
DEFINITION  Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 50, mRNA (cDNA
            clone IMAGE:3351405), partial cds.
ACCESSION   BC000210
VERSION     BC000210.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1640)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1640)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
            Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
            Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
            Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
            Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
            Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
            Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
            George Yang, Scott Zuyderduyn, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: c Column: 9.
FEATURES             Location/Qualifiers
     source          1..1640
                     /db_xref="H-InvDB:HIT000085806"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3351405"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..1640
                     /gene="DDX50"
                     /gene_synonym="GU2"
                     /gene_synonym="GUB"
                     /gene_synonym="MGC3199"
                     /gene_synonym="RH-II/GuB"
                     /db_xref="GeneID:79009"
     CDS             <1..1405
                     /gene="DDX50"
                     /gene_synonym="GU2"
                     /gene_synonym="GUB"
                     /gene_synonym="MGC3199"
                     /gene_synonym="RH-II/GuB"
                     /codon_start=2
                     /product="DDX50 protein"
                     /protein_id="AAH00210.1"
                     /db_xref="GeneID:79009"
                     /translation="KDHLQSGRLDLSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKT
                     DSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAATTVEHLAIQCHWS
                     QRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHGDIAQSQREIT
                     LKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGIC
                     ICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFR
                     PSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQDVSCA
                     WKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAKLP
                     EIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
                     SGNRNRSRSGGHKRSFD"
     misc_feature    5..769
                     /gene="DDX50"
                     /gene_synonym="GU2"
                     /gene_synonym="GUB"
                     /gene_synonym="MGC3199"
                     /gene_synonym="RH-II/GuB"
                     /note="SrmB; Region: Superfamily II DNA and RNA helicases
                     [DNA replication, recombination, and repair /
                     Transcription / Translation, ribosomal structure and
                     biogenesis]"
                     /db_xref="CDD:COG0513"
BASE COUNT          501 a          298 c          388 g          453 t
ORIGIN      
        1 caaagaccat ctgcagagtg gccgattgga tctttctaaa ctgcgacatg ttgtgcttga
       61 tgaagtggat cagatgttag atttaggttt cgctgaacaa gttgaagata ttattcatga
      121 atcctacaaa actgattctg aagacaatcc tcagacttta cttttttctg caacttgccc
      181 acagtgggta tacaaagttg caaaaaaata catgaaatcc agatatgaac aggttgacct
      241 tgttggaaaa atgactcaaa aggctgcaac tactgtggaa catttggcca tccagtgtca
      301 ttggtctcag aggccagcag ttattggaga tgtccttcaa gtctacagtg ggtctgaagg
      361 gagggctatt attttctgtg agaccaagaa gaatgtaact gaaatggcca tgaatccaca
      421 cataaaacag aatgcccagt gtttacatgg ggacattgca cagtcacaaa gagaaattac
      481 actaaaaggc ttcagagaag gtagttttaa agttttggtg gcaaccaatg tggctgcccg
      541 tggtttggac attcctgaag ttgacctggt gattcaaagt tctcctcctc aggatgttga
      601 gtcctatatc catcgctctg gacgcacagg tagagctgga cggacaggga tttgtatatg
      661 tttttatcaa ccaagagaaa gaggtcaact aagatatgtg gaacaaaaag caggaattac
      721 ttttaaacgt gtaggtgttc cttctacaat ggatttagtt aaatctaaaa gcatggatgc
      781 catcaggtct ctggcttccg tttcttatgc tgctgttgat tttttccgac catcagctca
      841 gagactgata gaagagaaag gtgcagtgga tgcattggct gcagctttag cccacatttc
      901 tggtgcatca agctttgaac cacgatcttt gatcacctct gataaggggt ttgtgaccat
      961 gactctggaa agcctagagg aaatacagga tgtcagctgt gcttggaaag aacttaacag
     1021 aaagctgagt agtaatgcag tgtctcagat taccagaatg tgcctcctga aaggaaatat
     1081 gggtgtttgc tttgatgttc ctacaactga gtcagaaagg ttacaggcag agtggcatga
     1141 ttccgactgg atactctcag tgccagccaa attacctgaa attgaagaat attatgatgg
     1201 aaacacatct tctaattcca gacagaggag tggctggtca agtggtcgat caggccggtc
     1261 aggccggtca ggtggtcgat ctggcggccg gtcaggtaga cagagtcgac aaggaagtcg
     1321 ctcaggaagt cgacaagatg gtagaagacg aagtgggaat agaaatcgat caagaagtgg
     1381 gggccacaaa cggagttttg actgagtatt tgatagttaa tctaccagtg tgagcttgcc
     1441 tatttctgcc taatcatgta cattatccac caaaaattag gtcatcatag ttgaggtatg
     1501 tgtctgctat ttgcaaagaa gttggtcgta tttttttaaa aagtatttca caagaatgga
     1561 acaaatctac ttatccagtt atacctttga ataaaaaaac ctccttttat tgtctctttt
     1621 caaaaaaaaa aaaaaaaaaa
//