LOCUS BC000204 866 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ribosomal protein S3A, mRNA (cDNA clone MGC:3109
IMAGE:3350750), complete cds.
ACCESSION BC000204
VERSION BC000204.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 866)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 866)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 6 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis.
FEATURES Location/Qualifiers
source 1..866
/db_xref="H-InvDB:HIT000029430"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:3109 IMAGE:3350750"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..866
/gene="RPS3A"
/gene_synonym="FTE1"
/db_xref="GeneID:6189"
/db_xref="HGNC:HGNC:10421"
/db_xref="MIM:180478"
CDS 13..807
/gene="RPS3A"
/gene_synonym="FTE1"
/codon_start=1
/product="ribosomal protein S3A"
/protein_id="AAH00204.1"
/db_xref="GeneID:6189"
/db_xref="HGNC:HGNC:10421"
/db_xref="MIM:180478"
/translation="MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNI
GKTLVTRTQGTKIASDGLKGRVFEVSLADLQNDEVAFRKFKLITEDVQGKNCLTNFHG
MDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQ
VRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKML
KKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV"
BASE COUNT 299 a 154 c 205 g 208 t
ORIGIN
1 ctgaccagca ccatggcggt tggcaagaac aagcgcctta cgaaaggcgg caaaaaggga
61 gccaagaaga aagtggttga tccattttct aagaaagatt ggtatgatgt gaaagcacct
121 gctatgttca atataagaaa tattggaaag acgctcgtca ccaggaccca aggaaccaaa
181 attgcatctg atggtctcaa gggtcgtgtg tttgaagtga gtcttgctga tttgcagaat
241 gatgaagttg catttagaaa attcaagctg attactgaag atgttcaggg taaaaactgc
301 ctgactaact tccatggcat ggatcttacc cgtgacaaaa tgtgttccat ggtcaaaaaa
361 tggcagacaa tgattgaagc tcacgttgat gtcaagacta ccgatggtta cttgcttcgt
421 ctgttctgtg ttggttttac taaaaaacgc aacaatcaga tacggaagac ctcttatgct
481 cagcaccaac aggtccgcca aatccggaag aagatgatgg aaatcatgac ccgagaggtg
541 cagacaaatg acttgaaaga agtggtcaat aaattgattc cagacagcat tggaaaagac
601 atagaaaagg cttgccaatc tatttatcct ctccatgatg tcttcgttag aaaagtaaaa
661 atgctgaaga agcccaagtt tgaattggga aagctcatgg agcttcatgg tgaaggcagt
721 agttctggaa aagccactgg ggacgagaca ggtgctaaag ttgaacgagc tgatggatat
781 gaaccaccag tccaagaatc tgtttaaagt tcagacttca aatagtggca aataaaaagt
841 gctatttgta aaaaaaaaaa aaaaaa
//