LOCUS       BC000198                 705 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens splicing factor 3b, subunit 5, 10kDa, mRNA (cDNA clone
            MGC:3133 IMAGE:3352960), complete cds.
ACCESSION   BC000198
VERSION     BC000198.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 705)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 705)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (03-NOV-2000) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 6 Row: m Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 42740890.
FEATURES             Location/Qualifiers
     source          1..705
                     /db_xref="H-InvDB:HIT000029425"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:3133 IMAGE:3352960"
                     /tissue_type="Eye, retinoblastoma"
                     /clone_lib="NIH_MGC_16"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..705
                     /gene="SF3B5"
                     /gene_synonym="MGC3133"
                     /gene_synonym="SF3b10"
                     /db_xref="GeneID:83443"
                     /db_xref="HGNC:HGNC:21083"
     CDS             61..321
                     /gene="SF3B5"
                     /gene_synonym="MGC3133"
                     /gene_synonym="SF3b10"
                     /codon_start=1
                     /product="splicing factor 3b, subunit 5, 10kDa"
                     /protein_id="AAH00198.1"
                     /db_xref="GeneID:83443"
                     /db_xref="HGNC:HGNC:21083"
                     /translation="MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYM
                     GHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEEN"
BASE COUNT          175 a          193 c          190 g          147 t
ORIGIN      
        1 ctagagcggc gagttgttac ctgcgtcctc tgacctgaga gcgaagggga aagcggcgag
       61 atgactgacc gctacaccat ccatagccag ctggagcacc tgcagtccaa gtacatcggc
      121 acgggccacg ccgacaccac caagtgggag tggctggtga accaacaccg cgactcgtac
      181 tgctcctaca tgggccactt cgaccttctc aactacttcg ccattgcgga gaatgagagc
      241 aaagcgcgag tccgcttcaa cttgatggaa aagatgcttc agccttgtgg accgccagcc
      301 gacaagcccg aggagaactg agactctgcc ttaccaccgc agtgcggggc acctctccca
      361 gcgtttctcc ggtttgccaa tcctcttaag tattcctgtc tccaaaggac cggctctcca
      421 tggctcctgc gcctcgtgct ttccgcgtac agaagtgctt gcccggggag tcccgcctga
      481 cctgccttca tgtggaccct tagaacagca ctgggagacc agcaggactc ctgagaactg
      541 tgctggtgga gaggtcctag agccggcgag cgtttgagaa gagggcatgg cgctggagtg
      601 agatgggatt tggcgtctcg tttttggcta attgattgtc attggctttt tccataaagt
      661 ttagaaatcg ttcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//