LOCUS BC000198 705 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens splicing factor 3b, subunit 5, 10kDa, mRNA (cDNA clone MGC:3133 IMAGE:3352960), complete cds. ACCESSION BC000198 VERSION BC000198.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 705) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 705) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 6 Row: m Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42740890. FEATURES Location/Qualifiers source 1..705 /db_xref="H-InvDB:HIT000029425" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:3133 IMAGE:3352960" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_16" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..705 /gene="SF3B5" /gene_synonym="MGC3133" /gene_synonym="SF3b10" /db_xref="GeneID:83443" /db_xref="HGNC:HGNC:21083" CDS 61..321 /gene="SF3B5" /gene_synonym="MGC3133" /gene_synonym="SF3b10" /codon_start=1 /product="splicing factor 3b, subunit 5, 10kDa" /protein_id="AAH00198.1" /db_xref="GeneID:83443" /db_xref="HGNC:HGNC:21083" /translation="MTDRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYM GHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEEN" BASE COUNT 175 a 193 c 190 g 147 t ORIGIN 1 ctagagcggc gagttgttac ctgcgtcctc tgacctgaga gcgaagggga aagcggcgag 61 atgactgacc gctacaccat ccatagccag ctggagcacc tgcagtccaa gtacatcggc 121 acgggccacg ccgacaccac caagtgggag tggctggtga accaacaccg cgactcgtac 181 tgctcctaca tgggccactt cgaccttctc aactacttcg ccattgcgga gaatgagagc 241 aaagcgcgag tccgcttcaa cttgatggaa aagatgcttc agccttgtgg accgccagcc 301 gacaagcccg aggagaactg agactctgcc ttaccaccgc agtgcggggc acctctccca 361 gcgtttctcc ggtttgccaa tcctcttaag tattcctgtc tccaaaggac cggctctcca 421 tggctcctgc gcctcgtgct ttccgcgtac agaagtgctt gcccggggag tcccgcctga 481 cctgccttca tgtggaccct tagaacagca ctgggagacc agcaggactc ctgagaactg 541 tgctggtgga gaggtcctag agccggcgag cgtttgagaa gagggcatgg cgctggagtg 601 agatgggatt tggcgtctcg tttttggcta attgattgtc attggctttt tccataaagt 661 ttagaaatcg ttcaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //