LOCUS BC000154 1925 bp mRNA linear HUM 03-OCT-2003
DEFINITION Homo sapiens solute carrier family 12 (potassium/chloride
transporters), member 9, mRNA (cDNA clone MGC:5319 IMAGE:2900382),
complete cds.
ACCESSION BC000154
VERSION BC000154.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1925)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1925)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (03-NOV-2000) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Feb 23, 2001 this sequence version replaced BC000154.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: o Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9910385.
FEATURES Location/Qualifiers
source 1..1925
/db_xref="H-InvDB:HIT000029390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5319 IMAGE:2900382"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1925
/gene="SLC12A9"
/gene_synonym="CIP1"
/db_xref="GeneID:56996"
CDS 147..1763
/gene="SLC12A9"
/gene_synonym="CIP1"
/codon_start=1
/product="SLC12A9 protein"
/protein_id="AAH00154.1"
/db_xref="GeneID:56996"
/translation="MASESSPLLAYRLLGEEGVALPANGAGGPGGASARKLSTFLGVV
VPTVLSMFSIVVFLRIDATGPSGLRVLPQGYGWNLLYGSLLLGLVGGVCTLGAGLYAR
ASFLTFLLVSGSLASVLISFVAVGPRDIRLTPRPGPNGSSLPPRFGHFTGFNSSTLKD
NLGAGYAEDYTTGAVMNFASVFAVLFNGCTGIMAGANMSGELKDPSRAIPLGTIVAVA
YTFFVYVLLFFLSSFTCDRTLLQEDYGFFRAISLWPPLVLIGIYATALSASMSSLIGA
SRILHALARDDLFGVILAPAKVVSRGGNPWAAVLYSWGLVQLVLLAGKLNTLAAVVTV
FYLVAYAAVDLSCLSLEWASAPNFRPTFSLFSWHTCLLGVASCLLMMFLISPGAAGGS
LLLMGLLAALLTARGGPSSWGYVSQALLFHQVRKYLLRLDVRKDHVKFWRPQLLLLVG
NPRGALPLLRLANQLKKGGLYVLGHVTLGDLDSLPSDPVQPQYGAWLSLVDRAQVKAF
VDLTLSPSVRQGAQHLLRISGLESNSHPLP"
misc_feature 660..1298
/gene="SLC12A9"
/gene_synonym="CIP1"
/note="PotE; Region: Amino acid transporters [Amino acid
transport and metabolism]"
/db_xref="CDD:COG0531"
BASE COUNT 286 a 621 c 574 g 444 t
ORIGIN
1 cccggtagcc gcagctgtct tttccggccc ccgtgcactc tccgcccgag gcggagcccc
61 ccggctcgcg gggatcgccc ccgagcgctg cgtcctgcgg gtgggtcacc taacccattt
121 gtggcttcct ctacctgtgc tcagccatgg ccagcgagag ctcacctctg ctggcctacc
181 ggctcctggg ggaggagggg gttgccctcc ctgccaatgg ggccgggggt cctggagggg
241 cgtctgcccg gaagctgtcc accttcctgg gtgtggtggt gcccactgtc ctgtccatgt
301 tcagcatagt tgtttttctg aggattgatg ccacagggcc cagtgggctc cgggtcctgc
361 cccagggcta cggctggaac ctgctgtatg gctccctgct gctgggcctt gtgggtgggg
421 tctgcaccct gggagccggc ctctatgccc gggcctcatt cctcacattc ctgctggtct
481 ctggctccct ggcctctgtg ctcatcagtt ttgtggctgt ggggccgagg gacatccgct
541 tgactcctag gcctggcccc aatggctcct ccctgccgcc ccggtttggc cacttcaccg
601 gcttcaacag cagtaccctg aaggacaact tgggcgctgg ctatgctgag gactacacca
661 cgggagccgt gatgaatttt gccagcgtct ttgctgtcct ctttaacggc tgtacaggca
721 tcatggctgg ggccaacatg tcaggggagc tgaaggaccc cagccgggcg atccctctgg
781 gcacgatcgt cgccgtcgcc tacaccttct tcgtctatgt cctgcttttc tttctctcca
841 gcttcacttg tgacaggacc ctgctgcagg aagactatgg gttcttccgc gccatcagcc
901 tgtggccccc actggtgttg atcggaatct atgccacagc gctctcagcg tccatgagct
961 cgctcattgg tgcctcccgc atcctccatg ccctggcccg ggatgacctc tttggcgtga
1021 tcttggcacc ggccaaggtt gtgtcccgag ggggaaaccc ctgggcagct gtactttatt
1081 cttggggcct ggtgcagctg gtgctcctgg ctgggaagct gaacacactg gccgctgtgg
1141 tcactgtctt ctacctggtg gcctatgctg ccgtggacct gtcctgcctg agcctggagt
1201 gggcctcggc ccccaacttc cgccccacct tcagcctgtt ctcctggcac acctgcctgc
1261 tgggggtggc ctcctgcctg ctcatgatgt tcctcatcag tcctggcgcg gctggtggct
1321 ccctgctcct catgggtctg ctggctgccc tgctcaccgc gcgaggaggc cccagtagct
1381 ggggctatgt cagccaggcc ttgcttttcc accaggtgcg taagtatctg cttcggctgg
1441 acgtccggaa ggatcacgtg aagttctggc ggccccagct gctgctcctg gtggggaacc
1501 cccggggcgc cctgcctctg ctgcggttgg ccaaccagct taagaagggg gggctgtatg
1561 tgctgggcca cgtcaccctg ggagacctcg actccctgcc ctcggaccct gtacagccgc
1621 agtatggggc atggctcagc ctggtggacc gtgcccaggt gaaggctttt gtggatctaa
1681 ccctctcacc ctccgtgcgc cagggggctc agcatctgct gcgaatctcc ggcctcgagt
1741 caaactcgca tcccctgccg tgaaacagat gccccgctag aagccgggag tggacagcat
1801 cctcctctcc atagaattgg agtgctcatt agtggcaaga atcctaaggc gaactttgcc
1861 tgtttaagtg gaggagatta gtcactgaga taataaaata aatgcatgtg aaaaaaaaaa
1921 aaaaa
//